May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

XDHC - YAGQ
UniProt: Q46801 - P77183
Length: 477
Sequences: 541
Seq/Len: 1.24
I_Prob: 0.00

XDHC - Xanthine dehydrogenase iron-sulfur-binding subunit
Paralog alert: 0.66 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: XDHC YAGT
YAGQ - Uncharacterized protein YagQ
Paralog alert: 0.19 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: YAGQ
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
53_T 295_L 1.19 0.00
139_L 279_A 1.19 0.00
57_D 237_L 1.11 0.00
9_I 44_V 1.00 0.00
82_E 65_E 0.99 0.00
12_T 103_G 0.98 0.00
61_I 200_G 0.96 0.00
36_G 285_P 0.95 0.00
91_V 28_L 0.94 0.00
28_L 300_E 0.93 0.00
56_V 47_V 0.88 0.00
63_S 37_S 0.88 0.00
131_I 136_R 0.87 0.00
32_L 53_A 0.87 0.00
79_L 70_C 0.85 0.00
139_L 273_E 0.85 0.00
139_L 299_A 0.85 0.00
36_G 180_L 0.84 0.00
117_M 139_Q 0.84 0.00
17_P 275_T 0.84 0.00
10_E 182_I 0.84 0.00
111_I 170_F 0.83 0.00
113_A 26_T 0.81 0.00
136_A 281_V 0.80 0.00
22_A 277_I 0.79 0.00
139_L 182_I 0.79 0.00
13_I 124_L 0.79 0.00
21_H 275_T 0.78 0.00
76_I 138_E 0.78 0.00
111_I 95_D 0.78 0.00
21_H 307_H 0.77 0.00
84_K 96_R 0.77 0.00
97_K 53_A 0.77 0.00
83_A 285_P 0.76 0.00
119_A 37_S 0.76 0.00
149_V 206_F 0.76 0.00
56_V 216_Q 0.75 0.00
139_L 87_L 0.75 0.00
105_F 241_R 0.75 0.00
40_V 42_V 0.75 0.00
24_P 70_C 0.75 0.00
150_N 301_V 0.75 0.00
53_T 226_L 0.75 0.00
15_G 53_A 0.74 0.00
56_V 94_R 0.74 0.00
72_E 300_E 0.73 0.00
32_L 270_S 0.73 0.00
74_K 59_A 0.72 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.3392 seconds.