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OPENSEQ.org
S11 - S15
UniProt: P80376 - Q5SJ76
Length: 218
Sequences: 1117
Seq/Len: 5.17
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeKOContact Map
3v2c3v2cKO 3v2eKOContact Map
2uub2uubKOContact Map
2j002j00KO 2j02KOContact Map
3t1y3t1yKOContact Map
4juw4juwKOContact Map
2uua2uuaKOContact Map
4b3m4b3mKOContact Map
2uxc2uxcKOContact Map
4kix4kiyKO 4kj0KO 4kj2KO 4kj4KOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
85_R 87_I 0.92 0.01
3_K 17_R 0.90 0.01
99_Q 43_L 0.90 0.01
125_F 35_R 0.89 0.01
5_P 5_K 0.86 0.01
1_M 47_K 0.85 0.01
7_K 87_I 0.84 0.01
124_K 25_T 0.84 0.01
101_S 41_E 0.82 0.01
59_Y 46_H 0.82 0.01
3_K 15_F 0.82 0.01
6_S 9_Q 0.81 0.01
54_R 48_K 0.81 0.01
45_G 43_L 0.80 0.01
23_A 17_R 0.79 0.01
23_A 15_F 0.79 0.01
59_Y 50_H 0.78 0.01
51_K 65_R 0.78 0.01
39_P 87_I 0.77 0.01
105_V 41_E 0.77 0.01
30_V 58_M 0.76 0.01
93_Q 68_R 0.76 0.01
93_Q 62_Q 0.75 0.01
32_I 43_L 0.75 0.01
23_A 72_R 0.74 0.01
34_D 27_V 0.74 0.01
122_K 79_R 0.74 0.01
24_S 76_E 0.74 0.01
79_S 75_P 0.74 0.01
73_M 29_V 0.72 0.01
104_Q 43_L 0.72 0.01
38_N 51_H 0.72 0.01
114_V 54_R 0.71 0.01
1_M 4_T 0.71 0.01
35_P 65_R 0.71 0.00
93_Q 43_L 0.70 0.00
80_V 59_M 0.69 0.00
92_E 61_G 0.69 0.00
47_V 38_R 0.69 0.00
36_D 76_E 0.68 0.00
32_I 47_K 0.68 0.00
101_S 62_Q 0.68 0.00
83_I 81_L 0.67 0.00
56_G 32_L 0.67 0.00
114_V 38_R 0.67 0.00
124_K 62_Q 0.66 0.00
4_K 13_Q 0.66 0.00
59_Y 41_E 0.65 0.00
98_L 51_H 0.65 0.00
44_S 40_S 0.65 0.00
12_R 71_Q 0.65 0.00
28_T 32_L 0.64 0.00
122_K 17_R 0.64 0.00
32_I 51_H 0.64 0.00
67_D 9_Q 0.64 0.00
24_S 60_V 0.64 0.00
33_T 69_Y 0.63 0.00
79_S 65_R 0.63 0.00
19_A 15_F 0.62 0.00
15_A 6_E 0.62 0.00
9_K 83_E 0.62 0.00
106_K 14_E 0.62 0.00
73_M 17_R 0.62 0.00
40_I 37_N 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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