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OPENSEQ.org
S11 - S12
UniProt: P80376 - Q5SHN3
Length: 261
Sequences: 856
Seq/Len: 3.40
I_Prob: 0.81
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeKLContact Map
3v2c3v2cKL 3v2eKLContact Map
2uub2uubKLContact Map
2j002j00KL 2j02KLContact Map
3t1y3t1yKLContact Map
4juw4juwKLContact Map
2uua2uuaKLContact Map
4b3m4b3mKLContact Map
2uxc2uxcKLContact Map
4kix4kiyKL 4kj0KL 4kj2KL 4kj4KLContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
93_Q 59_S 1.54 0.81
48_I 82_I 1.47 0.77
79_S 82_I 1.40 0.72
119_C 34_C 1.27 0.62
47_V 98_V 1.21 0.56
57_T 106_G 1.19 0.53
93_Q 11_G 1.18 0.53
1_M 17_K 1.15 0.49
54_R 56_R 1.14 0.48
4_K 108_K 1.10 0.44
35_P 116_K 1.04 0.38
45_G 27_A 1.04 0.38
47_V 79_V 1.02 0.36
21_I 18_K 0.99 0.33
5_P 26_G 0.99 0.33
34_D 5_N 0.98 0.31
95_I 68_P 0.98 0.31
18_R 36_V 0.97 0.31
93_Q 21_V 0.97 0.31
67_D 113_S 0.97 0.30
5_P 108_K 0.96 0.30
30_V 22_P 0.96 0.30
6_S 109_D 0.93 0.27
93_Q 61_Y 0.92 0.26
99_Q 68_P 0.92 0.26
3_K 17_K 0.91 0.25
2_A 20_K 0.91 0.25
6_S 124_E 0.90 0.25
15_A 19_S 0.90 0.24
95_I 18_K 0.90 0.24
44_S 97_I 0.90 0.24
106_K 105_A 0.89 0.23
59_Y 111_K 0.88 0.23
31_T 60_G 0.88 0.23
4_K 17_K 0.88 0.22
35_P 98_V 0.88 0.22
74_A 40_V 0.88 0.22
113_P 123_K 0.87 0.22
10_V 119_T 0.87 0.22
4_K 14_K 0.87 0.22
124_K 21_V 0.86 0.21
11_K 79_V 0.86 0.21
54_R 11_G 0.85 0.20
85_R 5_N 0.84 0.19
6_S 15_V 0.84 0.19
67_D 20_K 0.84 0.19
38_N 5_N 0.84 0.19
25_Y 54_K 0.83 0.19
48_I 113_S 0.82 0.18
69_A 59_S 0.81 0.17
56_G 10_K 0.80 0.17
97_A 101_V 0.80 0.17
106_K 58_T 0.80 0.16
67_D 17_K 0.80 0.16
6_S 108_K 0.79 0.16
3_K 81_L 0.78 0.15
119_C 27_A 0.78 0.15
85_R 11_G 0.78 0.15
94_A 73_N 0.78 0.15
79_S 25_K 0.77 0.14
96_R 23_A 0.76 0.14
12_R 16_R 0.76 0.14
125_F 52_V 0.75 0.13
28_T 64_T 0.75 0.13
80_V 124_E 0.75 0.13
59_Y 70_E 0.75 0.13
31_T 34_C 0.75 0.13
84_V 96_H 0.75 0.13
57_T 35_T 0.75 0.13
98_L 111_K 0.74 0.13
2_A 16_R 0.74 0.13
16_S 68_P 0.74 0.13
81_D 30_R 0.74 0.13
21_I 97_I 0.74 0.13
77_M 14_K 0.74 0.13
91_R 56_R 0.74 0.12
41_T 35_T 0.73 0.12
3_K 109_D 0.73 0.12
127_K 111_K 0.73 0.12
36_D 25_K 0.73 0.12
22_H 98_V 0.72 0.12
11_K 121_K 0.72 0.12
119_C 116_K 0.72 0.11
2_A 109_D 0.71 0.11
66_L 113_S 0.71 0.11
58_P 40_V 0.70 0.11
79_S 79_V 0.70 0.11
2_A 21_V 0.70 0.11
107_S 70_E 0.70 0.11
103_L 111_K 0.70 0.11
5_P 125_A 0.70 0.10
6_S 10_K 0.70 0.10
107_S 58_T 0.70 0.10
1_M 82_I 0.70 0.10
22_H 65_A 0.69 0.10
80_V 82_I 0.69 0.10
48_I 27_A 0.69 0.10
96_R 88_K 0.69 0.10
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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