May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
S09 - S15
UniProt: P80374 - Q5SJ76
Length: 217
Sequences: 1234
Seq/Len: 5.74
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeIOContact Map
3v2c3v2cIO 3v2eIOContact Map
2uub2uubIOContact Map
2j002j00IO 2j02IOContact Map
3t1y3t1yIOContact Map
4juw4juwIOContact Map
2uua2uuaIOContact Map
4b3m4b3mIOContact Map
2uxc2uxcIOContact Map
4kix4kiyIO 4kj0IO 4kj2IO 4kj4IOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
33_F 3_I 0.95 0.01
99_L 87_I 0.94 0.01
122_A 58_M 0.90 0.01
100_G 21_D 0.87 0.01
123_P 48_K 0.79 0.01
121_R 70_L 0.79 0.01
7_T 57_L 0.78 0.01
92_Y 2_P 0.77 0.01
45_A 43_L 0.75 0.01
54_D 9_Q 0.73 0.01
50_L 57_L 0.72 0.01
41_V 89_G 0.70 0.01
71_S 57_L 0.70 0.01
75_D 51_H 0.69 0.01
94_A 13_Q 0.68 0.01
46_A 3_I 0.68 0.01
16_R 43_L 0.67 0.01
31_Q 79_R 0.65 0.01
90_P 5_K 0.65 0.01
35_E 47_K 0.64 0.01
118_K 16_A 0.63 0.01
17_V 54_R 0.62 0.01
98_P 9_Q 0.60 0.01
75_D 54_R 0.60 0.01
125_Y 88_R 0.60 0.01
14_V 35_R 0.60 0.01
6_G 27_V 0.60 0.01
81_I 44_K 0.59 0.01
85_L 71_Q 0.59 0.01
123_P 2_P 0.58 0.01
7_T 27_V 0.58 0.01
59_F 20_G 0.57 0.00
38_Q 89_G 0.56 0.00
90_P 89_G 0.56 0.00
5_Y 71_Q 0.56 0.00
46_A 60_V 0.56 0.00
23_N 13_Q 0.56 0.00
3_Q 40_S 0.56 0.00
71_S 2_P 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 2.5993 seconds.