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OPENSEQ.org
S09 - S17
UniProt: P80374 - Q5SHP7
Length: 233
Sequences: 1402
Seq/Len: 6.77
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeIQContact Map
3v2c3v2cIQ 3v2eIQContact Map
2uub2uubIQContact Map
2j002j00IQ 2j02IQContact Map
3t1y3t1yIQContact Map
4juw4juwIQContact Map
2uua2uuaIQContact Map
4b3m4b3mIQContact Map
2uxc2uxcIQContact Map
4kix4kiyIQ 4kj0IQ 4kj2IQ 4kj4IQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
13_A 37_K 0.90 0.01
32_D 81_R 0.81 0.01
50_L 43_L 0.79 0.01
41_V 3_K 0.77 0.01
38_Q 67_K 0.74 0.01
44_V 67_K 0.69 0.00
3_Q 26_Q 0.69 0.00
43_A 15_M 0.69 0.00
41_V 31_L 0.68 0.00
43_A 68_R 0.67 0.00
63_I 77_V 0.67 0.00
70_K 42_Y 0.65 0.00
46_A 36_I 0.65 0.00
114_Y 70_R 0.64 0.00
65_V 37_K 0.64 0.00
43_A 37_K 0.63 0.00
26_V 38_R 0.62 0.00
75_D 5_V 0.62 0.00
48_E 36_I 0.62 0.00
108_V 68_R 0.62 0.00
98_P 58_E 0.61 0.00
98_P 81_R 0.61 0.00
104_R 29_H 0.61 0.00
118_K 39_S 0.61 0.00
68_G 57_V 0.60 0.00
9_R 32_Y 0.60 0.00
126_S 61_E 0.60 0.00
58_H 67_K 0.60 0.00
94_A 31_L 0.59 0.00
30_G 18_T 0.59 0.00
75_D 43_L 0.59 0.00
32_D 11_V 0.58 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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