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OPENSEQ.org
S09 - S10
UniProt: P80374 - Q5SHN7
Length: 233
Sequences: 1091
Seq/Len: 4.83
I_Prob: 0.98
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeIJContact Map
3v2c3v2cIJ 3v2eIJContact Map
2uub2uubIJContact Map
2j002j00IJ 2j02IJContact Map
3t1y3t1yIJContact Map
4juw4juwIJContact Map
2uua2uuaIJContact Map
4b3m4b3mIJContact Map
2uxc2uxcIJContact Map
4kix4kiyIJ 4kj0IJ 4kj2IJ 4kj4IJContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
123_P 58_D 1.93 0.98
114_Y 61_E 1.48 0.90
116_K 58_D 1.43 0.89
122_A 58_D 1.14 0.69
109_V 96_I 1.10 0.65
114_Y 51_R 1.09 0.64
42_R 53_P 1.04 0.59
114_Y 16_L 1.03 0.58
35_E 33_Q 1.02 0.57
14_V 63_F 0.99 0.54
63_I 82_I 0.91 0.43
33_F 47_F 0.90 0.42
114_Y 59_S 0.84 0.35
97_K 63_F 0.84 0.35
118_K 53_P 0.84 0.35
82_A 48_T 0.84 0.35
118_K 80_K 0.83 0.34
13_A 28_R 0.81 0.31
31_Q 38_I 0.81 0.31
48_E 56_H 0.80 0.30
109_V 86_M 0.78 0.28
18_F 96_I 0.77 0.27
38_Q 58_D 0.77 0.27
121_R 79_R 0.75 0.25
14_V 99_K 0.75 0.24
117_H 50_I 0.75 0.24
114_Y 50_I 0.74 0.24
60_D 67_T 0.74 0.24
38_Q 69_N 0.74 0.24
18_F 89_D 0.73 0.22
87_Q 38_I 0.72 0.22
40_L 45_R 0.72 0.22
41_V 45_R 0.71 0.21
34_N 56_H 0.71 0.21
6_G 66_R 0.71 0.20
23_N 45_R 0.70 0.20
75_D 45_R 0.70 0.20
118_K 52_G 0.70 0.20
116_K 46_R 0.69 0.19
78_K 48_T 0.69 0.19
68_G 71_L 0.68 0.18
115_G 57_K 0.68 0.18
104_R 93_G 0.67 0.17
53_V 64_E 0.67 0.17
27_T 76_N 0.67 0.17
28_V 38_I 0.67 0.17
125_Y 56_H 0.66 0.17
86_V 78_N 0.66 0.16
12_E 76_N 0.66 0.16
125_Y 35_S 0.66 0.16
42_R 43_R 0.65 0.16
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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