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OPENSEQ.org
S09 - S12
UniProt: P80374 - Q5SHN3
Length: 260
Sequences: 999
Seq/Len: 3.98
I_Prob: 0.76
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeILContact Map
3v2c3v2cIL 3v2eILContact Map
2uub2uubILContact Map
2j002j00IL 2j02ILContact Map
3t1y3t1yILContact Map
4juw4juwILContact Map
2uua2uuaILContact Map
4b3m4b3mILContact Map
2uxc2uxcILContact Map
4kix4kiyIL 4kj0IL 4kj2IL 4kj4ILContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
125_Y 21_V 1.46 0.76
79_L 5_N 1.33 0.66
37_F 58_T 1.25 0.58
30_G 20_K 1.03 0.36
3_Q 98_V 1.00 0.33
77_I 4_I 1.00 0.33
4_Y 105_A 0.96 0.29
53_V 119_T 0.94 0.28
41_V 58_T 0.92 0.26
104_R 78_S 0.88 0.22
32_D 109_D 0.88 0.22
35_E 16_R 0.88 0.22
89_N 104_A 0.88 0.22
28_V 98_V 0.87 0.22
34_N 16_R 0.86 0.21
116_K 68_P 0.85 0.20
52_A 27_A 0.85 0.20
61_A 61_Y 0.84 0.19
82_A 22_P 0.84 0.19
39_G 79_V 0.83 0.19
70_K 64_T 0.83 0.18
27_T 109_D 0.83 0.18
116_K 79_V 0.82 0.18
97_K 17_K 0.82 0.17
27_T 124_E 0.82 0.17
5_Y 121_K 0.82 0.17
56_L 98_V 0.80 0.16
56_L 16_R 0.80 0.16
80_G 22_P 0.78 0.15
16_R 64_T 0.78 0.15
45_A 82_I 0.78 0.15
9_R 62_E 0.77 0.14
118_K 38_R 0.77 0.14
21_P 53_A 0.77 0.14
42_R 58_T 0.76 0.14
32_D 119_T 0.76 0.14
14_V 2_P 0.76 0.14
34_N 125_A 0.76 0.14
42_R 105_A 0.75 0.13
35_E 113_S 0.75 0.13
13_A 108_K 0.75 0.13
27_T 61_Y 0.75 0.13
90_P 58_T 0.74 0.13
40_L 108_K 0.74 0.13
9_R 81_L 0.74 0.13
38_Q 65_A 0.73 0.12
34_N 15_V 0.73 0.12
32_D 15_V 0.73 0.12
34_N 113_S 0.73 0.12
43_A 26_G 0.73 0.12
42_R 19_S 0.72 0.12
32_D 17_K 0.72 0.12
70_K 104_A 0.72 0.12
118_K 59_S 0.72 0.12
26_V 27_A 0.72 0.11
43_A 10_K 0.71 0.11
38_Q 18_K 0.71 0.11
37_F 33_V 0.71 0.11
121_R 105_A 0.70 0.11
90_P 79_V 0.70 0.10
16_R 11_G 0.70 0.10
34_N 14_K 0.69 0.10
86_V 5_N 0.69 0.10
12_E 20_K 0.68 0.10
90_P 119_T 0.68 0.10
75_D 30_R 0.68 0.10
95_K 104_A 0.68 0.10
114_Y 2_P 0.67 0.09
54_D 15_V 0.67 0.09
90_P 108_K 0.67 0.09
28_V 60_G 0.66 0.09
19_L 8_V 0.66 0.09
50_L 15_V 0.66 0.09
117_H 35_T 0.66 0.09
68_G 63_V 0.66 0.09
65_V 30_R 0.66 0.09
71_S 21_V 0.66 0.09
77_I 17_K 0.66 0.09
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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