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OPENSEQ.org
S04 - S16
UniProt: P80373 - Q5SJH3
Length: 297
Sequences: 1232
Seq/Len: 4.21
I_Prob: 0.14
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeDPContact Map
3v2c3v2cDP 3v2eDPContact Map
2uub2uubDPContact Map
2j002j00DP 2j02DPContact Map
3t1y3t1yDPContact Map
4juw4juwDPContact Map
2uua2uuaDPContact Map
4b3m4b3mDPContact Map
2uxc2uxcDPContact Map
4kix4kiyDP 4kj0DP 4kj2DP 4kj4DPContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
55_A 27_K 1.16 0.14
73_R 17_Y 0.90 0.06
73_R 52_D 0.81 0.04
77_N 39_Y 0.75 0.04
73_R 66_P 0.74 0.03
88_V 69_T 0.73 0.03
105_V 20_V 0.72 0.03
194_L 45_T 0.68 0.03
70_I 4_I 0.65 0.02
113_S 33_I 0.64 0.02
3_R 39_Y 0.63 0.02
165_M 36_I 0.62 0.02
209_R 16_H 0.62 0.02
77_N 27_K 0.62 0.02
171_G 31_K 0.61 0.02
201_Q 20_V 0.61 0.02
160_Q 42_R 0.61 0.02
151_K 40_D 0.61 0.02
85_K 73_L 0.61 0.02
70_I 81_R 0.60 0.02
197_P 40_D 0.60 0.02
5_I 39_Y 0.59 0.02
111_A 17_Y 0.58 0.02
159_R 60_L 0.58 0.02
38_Y 22_T 0.57 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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