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OPENSEQ.org
S04 - S05
UniProt: P80373 - Q5SHQ5
Length: 371
Sequences: 1071
Seq/Len: 2.93
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeDEContact Map
3v2c3v2cDE 3v2eDEContact Map
2uub2uubDEContact Map
2j002j00DE 2j02DEContact Map
3t1y3t1yDEContact Map
4juw4juwDEContact Map
2uua2uuaDEContact Map
4b3m4b3mDEContact Map
2uxc2uxcDEContact Map
4kix4kiyDE 4kj0DE 4kj2DE 4kj4DEContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
53_D 9_K 0.91 0.00
104_V 156_A 0.90 0.00
209_R 131_I 0.86 0.00
65_R 131_I 0.84 0.00
84_K 150_R 0.83 0.00
208_S 17_A 0.82 0.00
163_E 146_A 0.81 0.00
132_R 117_D 0.81 0.00
16_G 44_G 0.80 0.00
56_V 118_I 0.78 0.00
179_E 27_R 0.77 0.00
23_G 20_Q 0.76 0.00
180_G 137_E 0.74 0.00
11_L 6_F 0.74 0.00
26_C 14_R 0.74 0.00
198_V 13_I 0.73 0.00
136_P 41_V 0.72 0.00
177_D 48_A 0.72 0.00
42_Q 17_A 0.71 0.00
7_P 138_A 0.71 0.00
84_K 76_I 0.70 0.00
161_N 116_T 0.70 0.00
190_D 78_H 0.70 0.00
185_F 101_I 0.69 0.00
120_L 75_T 0.69 0.00
151_K 65_N 0.69 0.00
54_Y 109_I 0.69 0.00
154_N 109_I 0.69 0.00
117_A 19_M 0.68 0.00
24_E 53_L 0.68 0.00
142_P 67_V 0.68 0.00
136_P 137_E 0.68 0.00
154_N 140_R 0.67 0.00
86_K 95_A 0.67 0.00
19_L 151_L 0.66 0.00
147_A 69_V 0.66 0.00
126_I 83_E 0.66 0.00
172_P 12_L 0.66 0.00
47_R 105_V 0.66 0.00
197_P 118_I 0.65 0.00
99_S 74_G 0.65 0.00
132_R 115_V 0.65 0.00
148_V 37_R 0.65 0.00
55_A 144_T 0.65 0.00
156_E 12_L 0.64 0.00
79_F 92_K 0.64 0.00
209_R 101_I 0.64 0.00
172_P 117_D 0.64 0.00
139_R 118_I 0.64 0.00
139_R 19_M 0.64 0.00
19_L 26_F 0.64 0.00
156_E 8_E 0.64 0.00
111_A 157_H 0.63 0.00
81_E 58_A 0.63 0.00
175_S 106_P 0.63 0.00
28_S 100_V 0.63 0.00
50_R 63_R 0.63 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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