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OPENSEQ.org
S04 - S12
UniProt: P80373 - Q5SHN3
Length: 341
Sequences: 1079
Seq/Len: 3.24
I_Prob: 0.06
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeDLContact Map
3v2c3v2cDL 3v2eDLContact Map
2uub2uubDLContact Map
2j002j00DL 2j02DLContact Map
3t1y3t1yDLContact Map
4juw4juwDLContact Map
2uua2uuaDLContact Map
4b3m4b3mDLContact Map
2uxc2uxcDLContact Map
4kix4kiyDL 4kj0DL 4kj2DL 4kj4DLContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
155_L 109_D 1.14 0.06
161_N 36_V 1.14 0.06
138_Y 104_A 0.97 0.04
163_E 105_A 0.92 0.03
130_G 121_K 0.92 0.03
125_H 68_P 0.91 0.03
172_P 113_S 0.87 0.03
204_I 35_T 0.85 0.02
18_K 79_V 0.85 0.02
8_V 27_A 0.84 0.02
54_Y 101_V 0.84 0.02
138_Y 26_G 0.83 0.02
78_L 27_A 0.81 0.02
104_V 82_I 0.81 0.02
190_D 104_A 0.81 0.02
209_R 70_E 0.80 0.02
15_E 64_T 0.78 0.02
80_E 68_P 0.77 0.02
50_R 98_V 0.77 0.02
148_V 80_V 0.76 0.02
4_Y 30_R 0.76 0.02
48_A 54_K 0.76 0.02
104_V 119_T 0.75 0.02
192_E 119_T 0.75 0.02
141_R 20_K 0.74 0.02
55_A 30_R 0.72 0.02
174_L 24_L 0.71 0.01
192_E 17_K 0.71 0.01
187_R 30_R 0.71 0.01
183_G 122_P 0.70 0.01
160_Q 122_P 0.70 0.01
50_R 123_K 0.70 0.01
34_E 82_I 0.70 0.01
163_E 113_S 0.69 0.01
57_R 29_F 0.68 0.01
154_N 27_A 0.68 0.01
79_F 27_A 0.67 0.01
64_L 10_K 0.67 0.01
142_P 17_K 0.67 0.01
190_D 98_V 0.67 0.01
182_K 16_R 0.67 0.01
169_K 98_V 0.66 0.01
175_S 15_V 0.66 0.01
171_G 108_K 0.66 0.01
162_L 119_T 0.66 0.01
207_Y 35_T 0.66 0.01
168_R 101_V 0.65 0.01
204_I 8_V 0.65 0.01
198_V 58_T 0.65 0.01
161_N 40_V 0.65 0.01
174_L 113_S 0.65 0.01
20_Y 52_V 0.64 0.01
159_R 30_R 0.64 0.01
37_P 65_A 0.64 0.01
204_I 41_T 0.64 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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