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OPENSEQ.org
S04 - S20
UniProt: P80373 - P80380
Length: 315
Sequences: 1187
Seq/Len: 4.04
I_Prob: 0.03
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeDTContact Map
3v2c3v2cDT 3v2eDTContact Map
2uub2uubDTContact Map
2j002j00DT 2j02DTContact Map
3t1y3t1yDTContact Map
4juw4juwDTContact Map
2uua2uuaDTContact Map
4b3m4b3mDTContact Map
2uxc2uxcDTContact Map
4kix4kiyDT 4kj0DT 4kj2DT 4kj4DTContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
138_Y 82_S 1.03 0.03
136_P 46_E 0.79 0.01
42_Q 73_H 0.77 0.01
110_F 28_A 0.76 0.01
131_R 58_K 0.75 0.01
126_I 88_V 0.75 0.01
21_L 34_K 0.74 0.01
111_A 13_L 0.72 0.01
182_K 38_K 0.70 0.01
143_G 49_A 0.70 0.01
43_H 84_L 0.70 0.01
77_N 21_K 0.69 0.01
92_V 59_A 0.69 0.01
46_K 40_A 0.67 0.01
97_L 30_K 0.66 0.01
21_L 40_A 0.66 0.01
89_T 78_A 0.65 0.01
83_S 37_S 0.65 0.01
174_L 73_H 0.65 0.01
141_R 65_K 0.65 0.01
48_A 70_S 0.64 0.01
151_K 54_K 0.63 0.01
143_G 59_A 0.61 0.01
179_E 63_I 0.61 0.01
34_E 16_H 0.61 0.01
175_S 54_K 0.60 0.01
208_S 37_S 0.60 0.01
10_R 14_K 0.60 0.01
106_Y 32_A 0.59 0.01
203_V 10_L 0.59 0.01
209_R 25_R 0.59 0.01
65_R 66_A 0.59 0.01
55_A 29_K 0.59 0.01
52_S 76_A 0.58 0.01
56_V 46_E 0.58 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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