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OPENSEQ.org
S04 - S13
UniProt: P80373 - P80377
Length: 335
Sequences: 1148
Seq/Len: 3.47
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeDMContact Map
3v2c3v2cDM 3v2eDMContact Map
2uub2uubDMContact Map
2j002j00DM 2j02DMContact Map
3t1y3t1yDMContact Map
4juw4juwDMContact Map
2uua2uuaDMContact Map
4b3m4b3mDMContact Map
2uxc2uxcDMContact Map
4kix4kiyDM 4kj0DM 4kj2DM 4kj4DMContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
50_R 25_I 1.01 0.01
129_N 105_T 0.93 0.01
167_G 18_A 0.85 0.01
158_I 64_W 0.84 0.01
162_L 30_A 0.79 0.01
70_I 58_E 0.78 0.01
50_R 21_Y 0.77 0.01
203_V 14_R 0.77 0.01
37_P 44_R 0.76 0.01
55_A 77_N 0.75 0.01
174_L 30_A 0.75 0.01
177_D 79_K 0.73 0.01
180_G 65_K 0.72 0.01
199_N 115_K 0.72 0.01
110_F 105_T 0.71 0.01
78_L 72_A 0.71 0.01
116_Q 119_G 0.71 0.01
181_M 39_I 0.70 0.01
192_E 16_D 0.70 0.01
209_R 117_V 0.70 0.01
70_I 16_D 0.69 0.01
130_G 2_A 0.69 0.01
177_D 98_V 0.68 0.01
161_N 82_M 0.68 0.01
20_Y 102_R 0.68 0.01
125_H 21_Y 0.67 0.01
161_N 46_K 0.67 0.01
65_R 104_R 0.67 0.01
202_L 93_R 0.67 0.01
197_P 23_Y 0.67 0.01
97_L 107_A 0.67 0.01
161_N 44_R 0.66 0.01
49_R 84_I 0.66 0.01
70_I 9_I 0.65 0.01
144_D 105_T 0.65 0.01
67_I 56_L 0.65 0.01
112_V 83_D 0.64 0.01
95_G 22_I 0.64 0.01
204_I 76_A 0.63 0.01
199_N 18_A 0.63 0.00
6_G 75_A 0.63 0.00
52_S 65_K 0.62 0.00
154_N 7_V 0.62 0.00
51_P 119_G 0.62 0.00
131_R 83_D 0.62 0.00
38_Y 7_V 0.62 0.00
115_R 18_A 0.62 0.00
67_I 23_Y 0.62 0.00
112_V 115_K 0.61 0.00
134_D 46_K 0.61 0.00
65_R 11_R 0.61 0.00
42_Q 9_I 0.61 0.00
149_A 25_I 0.61 0.00
113_S 69_E 0.61 0.00
121_V 39_I 0.61 0.00
175_S 30_A 0.61 0.00
171_G 72_A 0.60 0.00
170_V 18_A 0.60 0.00
209_R 104_R 0.60 0.00
134_D 12_N 0.60 0.00
167_G 90_L 0.60 0.00
190_D 51_A 0.60 0.00
34_E 77_N 0.60 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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