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OPENSEQ.org
S03 - S06
UniProt: P80372 - Q5SLP8
Length: 340
Sequences: 954
Seq/Len: 3.07
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeCFContact Map
3v2c3v2cCF 3v2eCFContact Map
2uub2uubCFContact Map
2j002j00CF 2j02CFContact Map
3t1y3t1yCFContact Map
4juw4juwCFContact Map
2uua2uuaCFContact Map
4b3m4b3mCFContact Map
2uxc2uxcCFContact Map
4kix4kiyCF 4kj0CF 4kj2CF 4kj4CFContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
129_A 89_M 1.04 0.01
101_L 75_L 0.97 0.01
20_S 44_G 0.96 0.01
87_L 32_N 0.96 0.01
15_T 85_V 0.94 0.01
142_M 18_Q 0.92 0.01
39_I 3_R 0.91 0.01
154_S 7_N 0.91 0.01
154_S 48_L 0.87 0.01
43_L 31_E 0.86 0.01
23_Y 27_Q 0.86 0.01
150_K 50_Y 0.85 0.01
102_N 19_L 0.84 0.01
133_A 30_L 0.84 0.01
162_Q 7_N 0.83 0.01
208_I 81_I 0.81 0.01
117_A 44_G 0.81 0.01
198_V 69_E 0.80 0.01
141_V 17_S 0.79 0.01
108_N 90_V 0.78 0.01
126_R 16_Q 0.78 0.01
23_Y 96_P 0.78 0.01
135_K 91_V 0.78 0.01
79_R 38_E 0.77 0.01
6_H 2_R 0.77 0.01
16_R 17_S 0.77 0.01
185_G 38_E 0.76 0.01
139_Q 87_R 0.76 0.01
136_Q 57_Q 0.75 0.01
202_I 33_Y 0.75 0.01
158_G 78_E 0.75 0.01
23_Y 68_P 0.75 0.01
198_V 49_A 0.75 0.01
101_L 2_R 0.74 0.01
142_M 43_L 0.73 0.01
99_V 39_K 0.73 0.01
43_L 66_E 0.73 0.01
207_V 46_R 0.73 0.01
108_N 41_E 0.72 0.01
17_D 87_R 0.72 0.01
153_V 30_L 0.72 0.01
154_S 89_M 0.71 0.01
24_A 13_N 0.71 0.01
153_V 65_V 0.71 0.01
80_G 57_Q 0.71 0.01
161_E 67_M 0.70 0.01
154_S 10_L 0.70 0.01
80_G 47_R 0.70 0.01
118_Q 27_Q 0.70 0.01
72_K 79_L 0.69 0.01
102_N 26_I 0.69 0.01
142_M 90_V 0.69 0.01
82_E 65_V 0.68 0.01
38_R 62_W 0.68 0.01
161_E 79_L 0.68 0.01
64_V 6_V 0.68 0.01
12_L 19_L 0.68 0.01
86_V 88_V 0.68 0.01
187_A 9_V 0.68 0.01
137_A 49_A 0.67 0.01
10_F 81_I 0.67 0.01
68_V 8_I 0.67 0.01
66_V 70_D 0.67 0.01
87_L 60_F 0.67 0.01
128_F 35_A 0.66 0.01
72_K 72_V 0.66 0.01
117_A 59_Y 0.66 0.01
192_T 91_V 0.66 0.01
198_V 40_V 0.66 0.01
107_Q 51_P 0.66 0.01
167_W 63_Y 0.66 0.01
96_G 10_L 0.66 0.00
25_G 63_Y 0.65 0.00
34_L 94_Q 0.65 0.00
16_R 62_W 0.65 0.00
71_A 89_M 0.65 0.00
161_E 19_L 0.65 0.00
160_A 49_A 0.64 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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