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OPENSEQ.org
S03 - S12
UniProt: P80372 - Q5SHN3
Length: 371
Sequences: 1000
Seq/Len: 2.98
I_Prob: 0.15
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeCLContact Map
3v2c3v2cCL 3v2eCLContact Map
2uub2uubCLContact Map
2j002j00CL 2j02CLContact Map
3t1y3t1yCLContact Map
4juw4juwCLContact Map
2uua2uuaCLContact Map
4b3m4b3mCLContact Map
2uxc2uxcCLContact Map
4kix4kiyCL 4kj0CL 4kj2CL 4kj4CLContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
6_H 104_A 1.24 0.15
198_V 98_V 1.21 0.14
13_G 54_K 1.19 0.13
55_V 13_E 1.14 0.11
35_E 2_P 1.13 0.11
129_A 68_P 1.13 0.11
106_V 35_T 1.12 0.11
13_G 64_T 1.11 0.10
210_G 111_K 1.06 0.09
8_I 20_K 1.05 0.09
29_Y 36_V 1.05 0.09
140_R 65_A 1.05 0.09
5_I 108_K 1.03 0.08
140_R 79_V 0.98 0.07
163_A 21_V 0.98 0.07
186_F 70_E 0.97 0.07
104_Q 68_P 0.97 0.07
178_L 121_K 0.96 0.06
56_D 64_T 0.96 0.06
61_A 65_A 0.95 0.06
23_Y 14_K 0.93 0.06
82_E 98_V 0.92 0.06
54_R 70_E 0.92 0.06
51_G 8_V 0.91 0.05
100_A 11_G 0.91 0.05
69_H 27_A 0.90 0.05
15_T 54_K 0.90 0.05
151_V 52_V 0.90 0.05
129_A 2_P 0.89 0.05
5_I 109_D 0.89 0.05
208_I 121_K 0.88 0.05
209_G 70_E 0.88 0.05
16_R 105_A 0.88 0.05
207_V 82_I 0.85 0.04
10_F 2_P 0.85 0.04
101_L 70_E 0.85 0.04
134_I 52_V 0.85 0.04
18_W 59_S 0.85 0.04
54_R 98_V 0.85 0.04
3_N 60_G 0.84 0.04
132_R 33_V 0.84 0.04
97_K 101_V 0.84 0.04
203_F 58_T 0.84 0.04
159_G 62_E 0.84 0.04
32_L 17_K 0.84 0.04
93_K 17_K 0.83 0.04
56_D 70_E 0.83 0.04
8_I 113_S 0.82 0.04
18_W 30_R 0.82 0.04
99_V 27_A 0.81 0.04
206_E 58_T 0.81 0.04
23_Y 16_R 0.80 0.04
118_Q 61_Y 0.80 0.04
19_E 121_K 0.80 0.04
34_L 8_V 0.80 0.04
144_S 21_V 0.80 0.04
161_E 5_N 0.80 0.04
101_L 13_E 0.80 0.04
173_V 36_V 0.79 0.03
68_V 119_T 0.79 0.03
32_L 119_T 0.79 0.03
107_Q 101_V 0.79 0.03
123_Q 56_R 0.78 0.03
204_L 38_R 0.78 0.03
170_Q 79_V 0.78 0.03
141_V 36_V 0.78 0.03
36_D 62_E 0.77 0.03
142_M 14_K 0.77 0.03
138_V 116_K 0.77 0.03
69_H 113_S 0.77 0.03
132_R 40_V 0.77 0.03
79_R 52_V 0.76 0.03
82_E 101_V 0.76 0.03
6_H 26_G 0.76 0.03
8_I 14_K 0.76 0.03
16_R 54_K 0.75 0.03
102_N 19_S 0.75 0.03
149_A 108_K 0.75 0.03
211_Q 21_V 0.74 0.03
58_E 102_Y 0.74 0.03
24_A 94_R 0.74 0.03
103_V 105_A 0.73 0.03
17_D 11_G 0.73 0.03
70_V 16_R 0.73 0.03
103_V 116_K 0.73 0.03
107_Q 121_K 0.73 0.03
208_I 109_D 0.73 0.03
138_V 20_K 0.73 0.03
129_A 65_A 0.73 0.03
20_S 124_E 0.73 0.03
165_T 109_D 0.73 0.03
83_R 79_V 0.73 0.03
190_R 98_V 0.73 0.03
50_A 9_R 0.73 0.03
123_Q 40_V 0.72 0.03
193_Y 88_K 0.72 0.03
210_G 98_V 0.72 0.03
143_E 38_R 0.72 0.03
56_D 54_K 0.72 0.03
35_E 104_A 0.72 0.03
38_R 30_R 0.72 0.03
75_V 70_E 0.72 0.03
126_R 74_L 0.71 0.03
35_E 97_I 0.71 0.03
34_L 68_P 0.71 0.03
154_S 26_G 0.71 0.03
169_A 27_A 0.71 0.02
76_V 27_A 0.71 0.02
88_R 124_E 0.70 0.02
202_I 26_G 0.70 0.02
130_V 35_T 0.70 0.02
87_L 13_E 0.70 0.02
143_E 40_V 0.70 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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