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OPENSEQ.org
S03 - S04
UniProt: P80372 - P80373
Length: 448
Sequences: 1206
Seq/Len: 2.88
I_Prob: 0.62
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeCDContact Map
3v2c3v2cCD 3v2eCDContact Map
2uub2uubCDContact Map
2j002j00CD 2j02CDContact Map
3t1y3t1yCDContact Map
4juw4juwCDContact Map
2uua2uuaCDContact Map
4b3m4b3mCDContact Map
2uxc2uxcCDContact Map
4kix4kiyCD 4kj0CD 4kj2CD 4kj4CDContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
88_R 65_R 1.46 0.62
158_G 167_G 1.09 0.29
34_L 209_R 1.01 0.23
91_L 111_A 0.94 0.17
158_G 201_Q 0.92 0.17
176_H 158_I 0.90 0.15
87_L 16_G 0.89 0.14
30_R 55_A 0.82 0.11
66_V 141_R 0.82 0.11
8_I 209_R 0.82 0.11
84_I 4_Y 0.82 0.11
84_I 7_P 0.80 0.10
84_I 65_R 0.80 0.10
28_Q 156_E 0.80 0.10
18_W 57_R 0.79 0.10
119_R 48_A 0.79 0.10
112_S 179_E 0.78 0.10
103_V 91_S 0.76 0.09
55_V 165_M 0.76 0.08
129_A 10_R 0.75 0.08
32_L 209_R 0.75 0.08
162_Q 136_P 0.74 0.08
99_V 152_S 0.73 0.08
75_V 140_V 0.73 0.07
82_E 147_A 0.73 0.07
52_L 20_Y 0.72 0.07
101_L 180_G 0.71 0.07
32_L 55_A 0.71 0.07
120_V 201_Q 0.70 0.07
55_V 49_R 0.70 0.06
161_E 147_A 0.70 0.06
117_A 146_I 0.69 0.06
85_R 39_P 0.69 0.06
207_V 75_F 0.69 0.06
128_F 171_G 0.69 0.06
12_L 202_L 0.69 0.06
176_H 97_L 0.68 0.06
128_F 181_M 0.68 0.06
41_G 150_E 0.68 0.06
151_V 146_I 0.68 0.06
118_Q 50_R 0.68 0.06
162_Q 8_V 0.67 0.06
68_V 120_L 0.67 0.06
80_G 176_L 0.67 0.06
38_R 190_D 0.66 0.05
18_W 201_Q 0.66 0.05
162_Q 28_S 0.66 0.05
141_V 199_N 0.65 0.05
15_T 57_R 0.65 0.05
39_I 134_D 0.65 0.05
120_V 158_I 0.65 0.05
98_N 209_R 0.65 0.05
115_L 97_L 0.65 0.05
35_E 125_H 0.64 0.05
209_G 134_D 0.64 0.05
120_V 177_D 0.64 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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