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OPENSEQ.org
S02 - S15
UniProt: P80371 - Q5SJ76
Length: 345
Sequences: 1226
Seq/Len: 3.87
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeBOContact Map
3v2c3v2cBO 3v2eBOContact Map
2uub2uubBOContact Map
2j002j00BO 2j02BOContact Map
3t1y3t1yBOContact Map
4juw4juwBOContact Map
2uua2uuaBOContact Map
4b3m4b3mBOContact Map
2uxc2uxcBOContact Map
4kix4kiyBO 4kj0BO 4kj2BO 4kj4BOContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
42_I 70_L 0.99 0.01
48_M 54_R 0.92 0.01
53_R 54_R 0.90 0.01
31_Y 34_L 0.85 0.01
139_K 9_Q 0.83 0.01
124_S 75_P 0.80 0.01
151_G 55_G 0.79 0.01
109_S 31_L 0.79 0.01
113_H 83_E 0.76 0.01
112_V 71_Q 0.75 0.01
185_I 18_F 0.74 0.01
179_K 43_L 0.74 0.01
203_G 4_T 0.73 0.01
93_V 5_K 0.73 0.01
101_M 35_R 0.73 0.01
222_I 10_K 0.72 0.01
113_H 3_I 0.71 0.01
95_Q 46_H 0.71 0.01
83_M 68_R 0.70 0.01
199_Y 60_V 0.69 0.01
48_M 16_A 0.69 0.01
225_A 72_R 0.68 0.01
160_D 89_G 0.68 0.01
142_L 16_A 0.68 0.01
203_G 62_Q 0.66 0.01
220_D 27_V 0.66 0.01
51_L 43_L 0.66 0.01
67_T 7_E 0.66 0.01
131_P 60_V 0.65 0.01
124_S 79_R 0.65 0.01
162_I 46_H 0.65 0.01
142_L 45_V 0.65 0.01
153_R 52_S 0.64 0.01
63_M 13_Q 0.64 0.01
165_V 16_A 0.64 0.01
126_E 75_P 0.64 0.01
143_E 10_K 0.64 0.01
226_R 17_R 0.64 0.01
37_N 69_Y 0.64 0.01
71_V 71_Q 0.63 0.01
111_R 48_K 0.63 0.01
183_P 74_D 0.63 0.01
81_V 62_Q 0.62 0.01
207_A 89_G 0.62 0.01
215_L 57_L 0.62 0.00
179_K 17_R 0.62 0.00
48_M 24_S 0.62 0.00
37_N 77_R 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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