May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
S02 - S05
UniProt: P80371 - Q5SHQ5
Length: 418
Sequences: 1361
Seq/Len: 3.54
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeBEContact Map
3v2c3v2cBE 3v2eBEContact Map
2uub2uubBEContact Map
2j002j00BE 2j02BEContact Map
3t1y3t1yBEContact Map
4juw4juwBEContact Map
2uua2uuaBEContact Map
4b3m4b3mBEContact Map
2uxc2uxcBEContact Map
4kix4kiyBE 4kj0BE 4kj2BE 4kj4BEContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
203_G 127_N 1.11 0.05
148_Y 133_Y 1.00 0.04
121_L 4_T 0.93 0.03
31_Y 31_L 0.87 0.03
140_H 49_P 0.86 0.03
90_M 53_L 0.84 0.02
91_P 56_Q 0.82 0.02
17_F 31_L 0.82 0.02
119_E 8_E 0.82 0.02
120_A 65_N 0.82 0.02
108_I 27_R 0.81 0.02
167_P 29_G 0.80 0.02
118_L 122_E 0.80 0.02
64_R 68_E 0.80 0.02
148_Y 151_L 0.79 0.02
57_F 11_I 0.79 0.02
162_I 158_A 0.78 0.02
106_K 118_I 0.77 0.02
135_Q 154_G 0.77 0.02
33_Y 14_R 0.76 0.02
222_I 143_R 0.75 0.02
80_I 153_K 0.75 0.02
131_P 87_S 0.75 0.02
162_I 141_Q 0.75 0.02
150_S 155_E 0.74 0.02
76_Q 142_L 0.74 0.02
164_V 83_E 0.73 0.02
140_H 129_I 0.73 0.01
93_V 120_T 0.72 0.01
105_F 86_A 0.72 0.01
110_Q 138_A 0.72 0.01
168_T 87_S 0.71 0.01
141_E 17_A 0.71 0.01
150_S 115_V 0.71 0.01
81_V 34_V 0.71 0.01
23_R 25_R 0.70 0.01
40_H 87_S 0.70 0.01
92_Y 79_E 0.70 0.01
88_A 5_D 0.70 0.01
127_I 143_R 0.70 0.01
170_E 119_L 0.70 0.01
34_A 110_L 0.68 0.01
53_R 149_E 0.67 0.01
111_R 43_L 0.67 0.01
116_E 144_T 0.67 0.01
143_E 5_D 0.67 0.01
78_Q 4_T 0.67 0.01
138_L 7_E 0.67 0.01
24_W 22_G 0.66 0.01
171_A 66_M 0.66 0.01
58_I 76_I 0.66 0.01
158_L 33_V 0.66 0.01
136_V 145_K 0.66 0.01
82_R 118_I 0.66 0.01
29_A 120_T 0.66 0.01
85_A 15_R 0.66 0.01
101_M 24_R 0.66 0.01
131_P 151_L 0.65 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
Page generated in 0.2698 seconds.