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OPENSEQ.org
S02 - S17
UniProt: P80371 - Q5SHP7
Length: 361
Sequences: 1336
Seq/Len: 4.32
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeBQContact Map
3v2c3v2cBQ 3v2eBQContact Map
2uub2uubBQContact Map
2j002j00BQ 2j02BQContact Map
3t1y3t1yBQContact Map
4juw4juwBQContact Map
2uua2uuaBQContact Map
4b3m4b3mBQContact Map
2uxc2uxcBQContact Map
4kix4kiyBQ 4kj0BQ 4kj2BQ 4kj4BQContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_I 44_A 0.94 0.01
81_V 59_I 0.86 0.01
10_L 40_K 0.85 0.01
101_M 35_V 0.84 0.01
140_H 26_Q 0.84 0.01
197_V 22_L 0.82 0.01
159_P 54_G 0.81 0.01
84_E 7_T 0.80 0.01
174_V 16_Q 0.77 0.01
165_V 81_R 0.77 0.01
76_Q 61_E 0.77 0.01
140_H 38_R 0.73 0.01
66_G 5_V 0.73 0.00
181_F 67_K 0.72 0.00
203_G 38_R 0.72 0.00
78_Q 31_L 0.71 0.00
63_M 56_V 0.70 0.00
35_E 72_R 0.70 0.00
175_R 7_T 0.70 0.00
73_T 44_A 0.69 0.00
29_A 81_R 0.68 0.00
186_A 58_E 0.68 0.00
89_G 18_T 0.67 0.00
214_I 30_P 0.67 0.00
118_L 79_S 0.66 0.00
13_A 67_K 0.66 0.00
42_I 14_K 0.65 0.00
200_I 28_P 0.65 0.00
28_F 61_E 0.65 0.00
147_K 28_P 0.64 0.00
89_G 32_Y 0.63 0.00
186_A 5_V 0.63 0.00
101_M 24_E 0.63 0.00
75_K 4_K 0.62 0.00
118_L 20_T 0.61 0.00
143_E 81_R 0.61 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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