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OPENSEQ.org
S02 - S09
UniProt: P80371 - P80374
Length: 384
Sequences: 1425
Seq/Len: 4.03
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
2vqe2vqeBIContact Map
3v2c3v2cBI 3v2eBIContact Map
2uub2uubBIContact Map
2j002j00BI 2j02BIContact Map
3t1y3t1yBIContact Map
4juw4juwBIContact Map
2uua2uuaBIContact Map
4b3m4b3mBIContact Map
2uxc2uxcBIContact Map
4kix4kiyBI 4kj0BI 4kj2BI 4kj4BIContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
51_L 42_R 1.00 0.02
111_R 122_A 0.91 0.01
22_K 78_K 0.91 0.01
178_R 101_F 0.89 0.01
212_Q 109_V 0.89 0.01
30_R 77_I 0.87 0.01
12_E 7_T 0.87 0.01
221_L 121_R 0.81 0.01
20_E 79_L 0.80 0.01
88_A 33_F 0.78 0.01
136_V 118_K 0.77 0.01
41_I 13_A 0.77 0.01
142_L 3_Q 0.77 0.01
120_A 21_P 0.76 0.01
222_I 59_F 0.76 0.01
38_G 97_K 0.74 0.01
140_H 43_A 0.73 0.01
199_Y 121_R 0.72 0.01
142_L 20_R 0.72 0.01
169_K 42_R 0.71 0.01
162_I 121_R 0.71 0.01
140_H 88_Y 0.70 0.01
46_K 14_V 0.69 0.01
62_A 14_V 0.69 0.01
180_L 126_S 0.69 0.01
109_S 44_V 0.69 0.01
111_R 123_P 0.68 0.01
187_L 91_D 0.68 0.01
175_R 121_R 0.68 0.01
218_A 56_L 0.68 0.01
167_P 109_V 0.68 0.01
66_G 71_S 0.68 0.01
118_L 70_K 0.67 0.01
168_T 87_Q 0.67 0.01
136_V 82_A 0.67 0.01
147_K 63_I 0.66 0.01
96_R 83_R 0.66 0.01
43_D 46_A 0.66 0.01
179_K 13_A 0.65 0.01
7_V 106_A 0.65 0.01
139_K 61_A 0.65 0.01
94_N 52_A 0.65 0.01
40_H 117_H 0.65 0.01
83_M 46_A 0.65 0.01
147_K 14_V 0.64 0.01
139_K 35_E 0.64 0.01
37_N 64_T 0.64 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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