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OPENSEQ.org
L34 - S20
UniProt: P80340 - P80380
Length: 155
Sequences: 1066
Seq/Len: 8.14
I_Prob: 0.16
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cT 3v2d7 3v2eT 3v2f7Contact Map
2j002j00T 2j017 2j02T 2j037Contact Map
4juw4juwT 4jux7Contact Map
4kix4kix2 4kiyT 4kiz2 4kj0T 4kj12 4kj2T 4kj32 4kj4TContact Map
4kj54kj52 4kj6T 4kj72 4kj8T 4kj92 4kjaT 4kjb2 4kjcTContact Map
3uyd3uydW 3uye7 3uyfW 3uyg7Contact Map
4gd13r8s2 3r8t2 4gd1T 4gd2TContact Map
3ohc3ohcT 3ohdT 3ohj7 3ohk7Contact Map
3knh3knhT 3kni7 3knjT 3knk7Contact Map
3ohy3ohyT 3ohz7 3oi0T 3oi17Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
19_R 62_L 1.13 0.16
22_M 31_S 0.94 0.09
26_G 76_A 0.86 0.07
14_K 73_H 0.77 0.05
8_N 23_R 0.76 0.04
43_T 58_K 0.72 0.04
11_K 38_K 0.67 0.03
1_M 89_R 0.67 0.03
33_R 39_K 0.67 0.03
26_G 10_L 0.66 0.03
14_K 30_K 0.65 0.03
12_R 82_S 0.64 0.03
33_R 8_R 0.64 0.03
3_R 34_K 0.64 0.03
43_T 70_S 0.64 0.03
10_R 15_R 0.64 0.03
31_L 87_K 0.62 0.03
19_R 60_E 0.61 0.02
13_A 59_A 0.60 0.02
28_R 77_A 0.59 0.02
44_P 80_R 0.58 0.02
31_L 82_S 0.57 0.02
37_K 38_K 0.57 0.02
11_K 64_D 0.55 0.02
26_G 67_A 0.54 0.02
42_L 86_R 0.54 0.02
26_G 77_A 0.54 0.02
11_K 23_R 0.54 0.02
31_L 88_V 0.53 0.02
11_K 81_K 0.53 0.02
40_W 13_L 0.53 0.02
22_M 69_G 0.52 0.02
37_K 25_R 0.52 0.02
25_P 47_G 0.52 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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