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OPENSEQ.org
L32 - S06
UniProt: P80339 - Q5SLP8
Length: 161
Sequences: 939
Seq/Len: 6.02
I_Prob: 0.04
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cF 3v2d5 3v2eF 3v2f5Contact Map
2j002j00F 2j015 2j02F 2j035Contact Map
4juw4juwF 4jux5Contact Map
4kix4kix0 4kiyF 4kiz0 4kj0F 4kj10 4kj2F 4kj30 4kj4FContact Map
4kj54kj50 4kj6F 4kj70 4kj8F 4kj90 4kjaF 4kjb0 4kjcFContact Map
3uyd3uydI 3uye5 3uyfI 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1F 4gd2FContact Map
3ohc3ohcF 3ohdF 3ohj5 3ohk5Contact Map
3knh3knhF 3kni5 3knjF 3knk5Contact Map
3f1e3f1eF 3f1f5 3f1gF 3f1h5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
58_L 91_V 1.02 0.04
10_K 94_Q 0.96 0.03
5_P 52_I 0.91 0.03
28_P 23_K 0.76 0.02
55_R 9_V 0.74 0.02
8_K 43_L 0.73 0.02
57_V 86_R 0.73 0.01
54_G 63_Y 0.73 0.01
4_H 5_E 0.72 0.01
47_P 85_V 0.72 0.01
53_A 91_V 0.71 0.01
48_E 90_V 0.71 0.01
7_P 4_Y 0.71 0.01
9_K 59_Y 0.71 0.01
5_P 94_Q 0.70 0.01
19_R 9_V 0.68 0.01
25_L 2_R 0.68 0.01
39_M 17_S 0.68 0.01
27_P 52_I 0.68 0.01
30_L 10_L 0.67 0.01
39_M 88_V 0.66 0.01
12_S 80_R 0.65 0.01
44_T 17_S 0.65 0.01
55_R 74_D 0.65 0.01
60_V 10_L 0.65 0.01
38_A 39_K 0.65 0.01
54_G 64_Q 0.64 0.01
10_K 96_P 0.64 0.01
50_G 77_R 0.64 0.01
32_P 70_D 0.64 0.01
57_V 74_D 0.64 0.01
28_P 48_L 0.63 0.01
19_R 77_R 0.63 0.01
45_V 36_R 0.63 0.01
37_K 73_N 0.63 0.01
8_K 65_V 0.63 0.01
49_C 54_K 0.63 0.01
16_R 89_M 0.62 0.01
12_S 81_I 0.62 0.01
5_P 72_V 0.62 0.01
57_V 85_V 0.61 0.01
26_T 35_A 0.61 0.01
13_K 86_R 0.61 0.01
9_K 47_R 0.60 0.01
51_Y 63_Y 0.60 0.01
37_K 41_E 0.60 0.01
57_V 63_Y 0.60 0.01
28_P 86_R 0.59 0.01
55_R 70_D 0.59 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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