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OPENSEQ.org
L32 - S15
UniProt: P80339 - Q5SJ76
Length: 149
Sequences: 934
Seq/Len: 6.40
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2d5 3v2eO 3v2f5Contact Map
2j002j00O 2j015 2j02O 2j035Contact Map
4juw4juwO 4jux5Contact Map
4kix4kix0 4kiyO 4kiz0 4kj0O 4kj10 4kj2O 4kj30 4kj4OContact Map
4kj54kj50 4kj6O 4kj70 4kj8O 4kj90 4kjaO 4kjb0 4kjcOContact Map
3uyd3uydR 3uye5 3uyfR 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1O 4gd2OContact Map
3knh3knhO 3kni5 3knjO 3knk5Contact Map
3ohc3ohcO 3ohdO 3ohj5 3ohk5Contact Map
3ohy3ohyO 3ohz5 3oi0O 3oi15Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
23_H 43_L 0.97 0.02
23_H 52_S 0.90 0.01
58_L 64_R 0.90 0.01
44_T 62_Q 0.90 0.01
34_P 54_R 0.86 0.01
27_P 87_I 0.82 0.01
16_R 35_R 0.74 0.01
37_K 81_L 0.72 0.01
58_L 45_V 0.71 0.01
5_P 75_P 0.70 0.01
24_A 43_L 0.68 0.01
10_K 64_R 0.68 0.01
55_R 4_T 0.66 0.01
53_A 35_R 0.65 0.01
12_S 22_T 0.65 0.01
13_K 89_G 0.65 0.01
15_R 48_K 0.64 0.01
34_P 48_K 0.64 0.01
26_T 46_H 0.62 0.01
13_K 19_P 0.62 0.01
27_P 65_R 0.61 0.01
31_V 47_K 0.60 0.01
8_K 17_R 0.60 0.01
39_M 29_V 0.59 0.01
54_G 83_E 0.58 0.01
26_T 41_E 0.58 0.01
59_E 41_E 0.58 0.01
45_V 60_V 0.58 0.01
42_P 53_H 0.58 0.01
6_V 7_E 0.57 0.01
34_P 16_A 0.57 0.01
42_P 55_G 0.56 0.01
38_A 52_S 0.56 0.01
12_S 83_E 0.56 0.01
17_D 57_L 0.56 0.01
50_G 27_V 0.55 0.01
16_R 64_R 0.55 0.01
28_P 61_G 0.55 0.01
30_L 7_E 0.55 0.01
36_C 61_G 0.55 0.01
44_T 1_M 0.55 0.01
8_K 35_R 0.54 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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