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OPENSEQ.org
L32 - L36
UniProt: P80339 - Q5SHR2
Length: 97
Sequences: 545
Seq/Len: 5.80
I_Prob: 0.13
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d59 3v2f59Contact Map
2j002j0159 2j0359Contact Map
4juw4jux59Contact Map
4kix4kix04 4kiz04 4kj104 4kj304Contact Map
4kj54kj504 4kj704 4kj904 4kjb04Contact Map
2zjr2zjrZ4Contact Map
4btc4btd59Contact Map
3v223v2359 3v2559Contact Map
4gd13r8s04 3r8t04Contact Map
3knh3kni59 3knk59Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
38_A 37_G 1.12 0.13
7_P 21_G 1.08 0.12
30_L 18_R 1.02 0.10
16_R 20_H 1.01 0.09
6_V 32_H 1.00 0.09
8_K 5_A 0.95 0.08
53_A 25_V 0.92 0.07
13_K 31_K 0.91 0.07
51_Y 16_V 0.91 0.07
19_R 2_K 0.87 0.06
27_P 10_I 0.84 0.05
47_P 31_K 0.81 0.05
19_R 33_K 0.80 0.04
51_Y 30_P 0.79 0.04
9_K 33_K 0.79 0.04
8_K 22_R 0.77 0.04
12_S 10_I 0.77 0.04
47_P 32_H 0.76 0.04
23_H 35_R 0.74 0.04
49_C 27_C 0.74 0.04
32_P 20_H 0.73 0.03
19_R 4_R 0.72 0.03
24_A 12_D 0.71 0.03
50_G 27_C 0.71 0.03
13_K 26_I 0.71 0.03
46_C 27_C 0.71 0.03
24_A 24_Y 0.71 0.03
50_G 32_H 0.70 0.03
41_P 20_H 0.69 0.03
11_T 9_R 0.69 0.03
41_P 23_V 0.67 0.03
46_C 11_C 0.67 0.03
38_A 5_A 0.67 0.03
10_K 10_I 0.67 0.03
36_C 31_K 0.65 0.03
39_M 17_I 0.65 0.02
29_T 35_R 0.64 0.02
7_P 29_N 0.63 0.02
49_C 11_C 0.63 0.02
49_C 32_H 0.63 0.02
6_V 27_C 0.63 0.02
46_C 32_H 0.63 0.02
14_A 17_I 0.62 0.02
11_T 31_K 0.62 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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