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OPENSEQ.org
L32 - S17
UniProt: P80339 - Q5SHP7
Length: 165
Sequences: 864
Seq/Len: 6.17
I_Prob: 0.78
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cQ 3v2d5 3v2eQ 3v2f5Contact Map
2j002j00Q 2j015 2j02Q 2j035Contact Map
4juw4juwQ 4jux5Contact Map
4kix4kix0 4kiyQ 4kiz0 4kj0Q 4kj10 4kj2Q 4kj30 4kj4QContact Map
4kj54kj50 4kj6Q 4kj70 4kj8Q 4kj90 4kjaQ 4kjb0 4kjcQContact Map
3uyd3uydT 3uye5 3uyfT 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1Q 4gd2QContact Map
3ohc3ohcQ 3ohdQ 3ohj5 3ohk5Contact Map
3knh3knhQ 3kni5 3knjQ 3knk5Contact Map
3ohy3ohyQ 3ohz5 3oi0Q 3oi15Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
55_R 37_K 1.43 0.78
37_K 44_A 0.89 0.27
59_E 47_P 0.84 0.23
53_A 23_V 0.80 0.19
25_L 51_Y 0.74 0.15
53_A 67_K 0.73 0.15
34_P 72_R 0.73 0.14
46_C 18_T 0.73 0.14
34_P 19_V 0.72 0.14
10_K 45_H 0.72 0.14
32_P 58_E 0.69 0.12
13_K 60_I 0.67 0.11
5_P 34_K 0.67 0.11
10_K 28_P 0.67 0.11
14_A 36_I 0.65 0.10
13_K 37_K 0.64 0.09
48_E 11_V 0.64 0.09
29_T 11_V 0.63 0.09
55_R 38_R 0.62 0.09
6_V 40_K 0.62 0.09
7_P 3_K 0.62 0.08
39_M 37_K 0.60 0.08
59_E 7_T 0.60 0.08
38_A 79_S 0.59 0.07
27_P 38_R 0.59 0.07
17_D 9_V 0.59 0.07
6_V 39_S 0.57 0.07
25_L 4_K 0.57 0.07
14_A 80_G 0.57 0.07
28_P 7_T 0.57 0.06
9_K 67_K 0.56 0.06
6_V 37_K 0.56 0.06
21_S 71_F 0.56 0.06
47_P 74_L 0.55 0.06
24_A 28_P 0.55 0.06
27_P 75_R 0.55 0.06
24_A 54_G 0.55 0.06
45_V 14_K 0.54 0.06
41_P 30_P 0.54 0.05
33_C 74_L 0.53 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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