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OPENSEQ.org
L32 - S12
UniProt: P80339 - Q5SHN3
Length: 192
Sequences: 573
Seq/Len: 3.15
I_Prob: 0.29
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cL 3v2d5 3v2eL 3v2f5Contact Map
2j002j00L 2j015 2j02L 2j035Contact Map
4juw4juwL 4jux5Contact Map
4kix4kix0 4kiyL 4kiz0 4kj0L 4kj10 4kj2L 4kj30 4kj4LContact Map
4kj54kj50 4kj6L 4kj70 4kj8L 4kj90 4kjaL 4kjb0 4kjcLContact Map
3uyd3uydO 3uye5 3uyfO 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1L 4gd2LContact Map
3knh3knhL 3kni5 3knjL 3knk5Contact Map
3ohc3ohcL 3ohdL 3ohj5 3ohk5Contact Map
3f1e3f1eL 3f1f5 3f1gL 3f1h5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
36_C 64_T 1.29 0.29
13_K 53_A 1.28 0.28
10_K 56_R 1.22 0.24
43_H 120_K 1.11 0.18
8_K 52_V 1.10 0.17
30_L 18_K 1.09 0.17
14_A 70_E 1.01 0.13
51_Y 13_E 0.96 0.11
38_A 102_Y 0.95 0.10
37_K 5_N 0.94 0.10
8_K 34_C 0.93 0.10
12_S 61_Y 0.92 0.09
42_P 68_P 0.89 0.08
4_H 36_V 0.87 0.08
5_P 111_K 0.87 0.08
16_R 52_V 0.86 0.07
8_K 40_V 0.86 0.07
25_L 111_K 0.86 0.07
25_L 61_Y 0.86 0.07
54_G 93_V 0.85 0.07
9_K 109_D 0.85 0.07
6_V 27_A 0.85 0.07
34_P 119_T 0.85 0.07
5_P 102_Y 0.84 0.07
46_C 104_A 0.83 0.07
44_T 21_V 0.83 0.07
13_K 54_K 0.82 0.06
6_V 79_V 0.81 0.06
14_A 64_T 0.81 0.06
11_T 79_V 0.81 0.06
29_T 104_A 0.80 0.06
32_P 60_G 0.79 0.06
24_A 65_A 0.79 0.06
34_P 19_S 0.79 0.06
55_R 113_S 0.77 0.05
46_C 2_P 0.76 0.05
21_S 34_C 0.75 0.05
7_P 2_P 0.75 0.05
46_C 80_V 0.74 0.05
56_K 30_R 0.74 0.04
9_K 102_Y 0.74 0.04
16_R 38_R 0.73 0.04
11_T 40_V 0.73 0.04
30_L 59_S 0.73 0.04
13_K 96_H 0.73 0.04
20_R 29_F 0.73 0.04
4_H 70_E 0.72 0.04
32_P 79_V 0.72 0.04
6_V 22_P 0.71 0.04
8_K 38_R 0.71 0.04
49_C 68_P 0.71 0.04
6_V 36_V 0.71 0.04
60_V 113_S 0.70 0.04
20_R 120_K 0.69 0.04
13_K 26_G 0.69 0.04
10_K 2_P 0.69 0.04
22_H 20_K 0.69 0.04
27_P 121_K 0.69 0.04
59_E 5_N 0.69 0.04
44_T 98_V 0.69 0.04
44_T 30_R 0.68 0.04
33_C 97_I 0.68 0.04
21_S 26_G 0.68 0.03
5_P 1_M 0.68 0.03
53_A 88_K 0.67 0.03
58_L 17_K 0.67 0.03
27_P 14_K 0.66 0.03
58_L 97_I 0.66 0.03
4_H 93_V 0.66 0.03
21_S 98_V 0.66 0.03
40_K 58_T 0.66 0.03
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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