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OPENSEQ.org
L32 - S20
UniProt: P80339 - P80380
Length: 166
Sequences: 1006
Seq/Len: 7.08
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cT 3v2d5 3v2eT 3v2f5Contact Map
2j002j00T 2j015 2j02T 2j035Contact Map
4juw4juwT 4jux5Contact Map
4kix4kix0 4kiyT 4kiz0 4kj0T 4kj10 4kj2T 4kj30 4kj4TContact Map
4kj54kj50 4kj6T 4kj70 4kj8T 4kj90 4kjaT 4kjb0 4kjcTContact Map
3uyd3uydW 3uye5 3uyfW 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1T 4gd2TContact Map
3ohc3ohcT 3ohdT 3ohj5 3ohk5Contact Map
3knh3knhT 3kni5 3knjT 3knk5Contact Map
3f1e3f1eT 3f1f5 3f1gT 3f1h5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
16_R 38_K 0.89 0.01
47_P 47_G 0.87 0.01
59_E 74_K 0.81 0.01
13_K 10_L 0.77 0.01
9_K 8_R 0.77 0.01
44_T 25_R 0.74 0.01
37_K 34_K 0.71 0.00
58_L 45_Q 0.69 0.00
28_P 66_A 0.68 0.00
5_P 61_S 0.67 0.00
53_A 56_M 0.67 0.00
7_P 26_N 0.67 0.00
30_L 81_K 0.65 0.00
26_T 53_L 0.65 0.00
19_R 66_A 0.63 0.00
55_R 83_R 0.60 0.00
30_L 35_T 0.59 0.00
5_P 72_L 0.58 0.00
47_P 52_A 0.58 0.00
4_H 40_A 0.58 0.00
42_P 80_R 0.57 0.00
37_K 40_A 0.57 0.00
5_P 40_A 0.57 0.00
40_K 73_H 0.56 0.00
28_P 64_D 0.56 0.00
54_G 27_K 0.55 0.00
37_K 16_H 0.55 0.00
14_A 89_R 0.54 0.00
11_T 59_A 0.54 0.00
31_V 10_L 0.54 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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