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OPENSEQ.org
L32 - S11
UniProt: P80339 - P80376
Length: 189
Sequences: 685
Seq/Len: 3.72
I_Prob: 0.08
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cK 3v2d5 3v2eK 3v2f5Contact Map
2j002j00K 2j015 2j02K 2j035Contact Map
4juw4juwK 4jux5Contact Map
4kix4kix0 4kiyK 4kiz0 4kj0K 4kj10 4kj2K 4kj30 4kj4KContact Map
4kj54kj50 4kj6K 4kj70 4kj8K 4kj90 4kjaK 4kjb0 4kjcKContact Map
3uyd3uydN 3uye5 3uyfN 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1K 4gd2KContact Map
3knh3knhK 3kni5 3knjK 3knk5Contact Map
3ohc3ohcK 3ohdK 3ohj5 3ohk5Contact Map
3f1e3f1eK 3f1f5 3f1gK 3f1h5Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
31_V 21_I 1.13 0.08
8_K 125_F 1.11 0.08
20_R 53_S 1.09 0.07
28_P 105_V 1.06 0.07
51_Y 45_G 1.03 0.06
57_V 38_N 0.93 0.04
15_R 59_Y 0.93 0.04
14_A 97_A 0.90 0.04
16_R 24_S 0.87 0.04
6_V 56_G 0.86 0.03
12_S 19_A 0.85 0.03
14_A 31_T 0.84 0.03
6_V 28_T 0.81 0.03
7_P 60_A 0.81 0.03
30_L 29_I 0.80 0.03
21_S 14_V 0.79 0.03
45_V 5_P 0.79 0.03
51_Y 70_K 0.79 0.03
37_K 50_Y 0.79 0.03
15_R 106_K 0.77 0.03
11_T 38_N 0.77 0.03
29_T 72_A 0.77 0.02
34_P 124_K 0.77 0.02
37_K 59_Y 0.76 0.02
45_V 15_A 0.75 0.02
24_A 45_G 0.75 0.02
12_S 85_R 0.74 0.02
22_H 22_H 0.74 0.02
53_A 15_A 0.73 0.02
6_V 39_P 0.73 0.02
39_M 30_V 0.73 0.02
51_Y 41_T 0.72 0.02
34_P 94_A 0.72 0.02
59_E 59_Y 0.71 0.02
14_A 78_Q 0.71 0.02
24_A 85_R 0.71 0.02
28_P 24_S 0.70 0.02
10_K 97_A 0.70 0.02
37_K 96_R 0.69 0.02
8_K 18_R 0.69 0.02
55_R 97_A 0.69 0.02
55_R 4_K 0.69 0.02
5_P 82_V 0.68 0.02
19_R 84_V 0.68 0.02
19_R 116_H 0.68 0.02
12_S 48_I 0.67 0.02
18_A 9_K 0.67 0.02
38_A 80_V 0.67 0.02
12_S 124_K 0.66 0.02
23_H 22_H 0.66 0.02
35_E 100_A 0.65 0.01
20_R 58_P 0.65 0.01
26_T 30_V 0.65 0.01
54_G 70_K 0.65 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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