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OPENSEQ.org
L32 - S02
UniProt: P80339 - P80371
Length: 316
Sequences: 838
Seq/Len: 2.94
I_Prob: 0.19
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cB 3v2d5 3v2eB 3v2f5Contact Map
2j002j00B 2j015 2j02B 2j035Contact Map
4juw4juwB 4jux5Contact Map
4kix4kix0 4kiyB 4kiz0 4kj0B 4kj10 4kj2B 4kj30 4kj4BContact Map
4kj54kj50 4kj6B 4kj70 4kj8B 4kj90 4kjaB 4kjb0 4kjcBContact Map
3uyd3uydE 3uye5 3uyfE 3uyg5Contact Map
4gd13r8s0 3r8t0 4gd1B 4gd2BContact Map
3knh3knhB 3kni5 3knjB 3knk5Contact Map
3ohc3ohcB 3ohdB 3ohj5 3ohk5Contact Map
3ohy3ohyB 3ohz5 3oi0B 3oi15Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_K 142_L 1.26 0.19
16_R 179_K 1.07 0.11
37_K 140_H 1.06 0.10
8_K 101_M 1.03 0.09
16_R 140_H 0.98 0.08
12_S 147_K 0.96 0.07
59_E 30_R 0.92 0.07
27_P 164_V 0.91 0.06
33_C 105_F 0.91 0.06
56_K 112_V 0.84 0.05
53_A 47_T 0.84 0.05
21_S 217_R 0.82 0.04
54_G 52_E 0.80 0.04
19_R 170_E 0.80 0.04
7_P 10_L 0.79 0.04
53_A 51_L 0.79 0.04
42_P 151_G 0.77 0.04
22_H 179_K 0.76 0.03
47_P 174_V 0.76 0.03
45_V 42_I 0.76 0.03
7_P 35_E 0.75 0.03
48_E 52_E 0.75 0.03
53_A 52_E 0.74 0.03
58_L 143_E 0.73 0.03
55_R 114_R 0.73 0.03
38_A 124_S 0.73 0.03
36_C 213_L 0.73 0.03
13_K 79_D 0.72 0.03
22_H 95_Q 0.71 0.03
9_K 22_K 0.71 0.03
19_R 207_A 0.71 0.03
23_H 31_Y 0.70 0.03
15_R 117_E 0.70 0.03
20_R 13_A 0.70 0.03
21_S 81_V 0.70 0.03
21_S 182_I 0.70 0.03
51_Y 162_I 0.70 0.03
5_P 155_L 0.69 0.03
31_V 190_T 0.69 0.03
7_P 23_R 0.69 0.03
21_S 72_G 0.69 0.03
15_R 51_L 0.69 0.03
22_H 68_I 0.68 0.03
35_E 199_Y 0.68 0.03
59_E 224_Q 0.67 0.02
15_R 58_I 0.67 0.02
26_T 165_V 0.67 0.02
16_R 148_Y 0.67 0.02
40_K 10_L 0.66 0.02
22_H 113_H 0.66 0.02
13_K 118_L 0.66 0.02
45_V 216_S 0.66 0.02
7_P 76_Q 0.66 0.02
17_D 122_F 0.66 0.02
9_K 142_L 0.66 0.02
14_A 112_V 0.65 0.02
31_V 169_K 0.65 0.02
55_R 181_F 0.65 0.02
22_H 140_H 0.65 0.02
10_K 168_T 0.65 0.02
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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