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OPENSEQ.org
L32 - L34
UniProt: P80339 - P80340
Length: 109
Sequences: 723
Seq/Len: 7.09
I_Prob: 0.02
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d57 3v2f57Contact Map
2j002j0157 2j0357Contact Map
4juw4jux57Contact Map
4kix4kix02 4kiz02 4kj102 4kj302Contact Map
4kj54kj502 4kj702 4kj902 4kjb02Contact Map
2zjr2zjrZ2Contact Map
4btc4btd57Contact Map
3uyd3uye57 3uyg57Contact Map
3v223v2357 3v2557Contact Map
4gd13r8s02 3r8t02Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
20_R 16_H 0.97 0.02
31_V 24_T 0.95 0.02
53_A 36_Q 0.86 0.01
6_V 3_R 0.86 0.01
13_K 33_R 0.83 0.01
16_R 12_R 0.81 0.01
35_E 32_K 0.81 0.01
6_V 2_K 0.80 0.01
6_V 14_K 0.80 0.01
45_V 37_K 0.78 0.01
18_A 12_R 0.75 0.01
4_H 5_W 0.75 0.01
57_V 24_T 0.73 0.01
59_E 9_R 0.73 0.01
55_R 23_R 0.71 0.01
12_S 43_T 0.68 0.01
43_H 16_H 0.68 0.01
42_P 41_R 0.68 0.01
54_G 6_Q 0.67 0.01
6_V 8_N 0.67 0.01
14_A 3_R 0.67 0.01
55_R 25_P 0.66 0.01
53_A 25_P 0.66 0.01
13_K 10_R 0.65 0.01
57_V 33_R 0.65 0.01
19_R 19_R 0.63 0.01
13_K 23_R 0.63 0.01
40_K 37_K 0.62 0.01
29_T 15_T 0.61 0.01
14_A 30_V 0.61 0.01
37_K 8_N 0.59 0.01
29_T 23_R 0.59 0.01
44_T 32_K 0.59 0.01
45_V 20_A 0.59 0.01
11_T 10_R 0.57 0.01
10_K 30_V 0.56 0.01
41_P 36_Q 0.56 0.01
44_T 1_M 0.55 0.01
12_S 21_R 0.55 0.01
38_A 13_A 0.55 0.01
22_H 30_V 0.55 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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