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OPENSEQ.org

YDES - YDET
UniProt: P77789 - P76137
Length: 558
Sequences: 672
Seq/Len: 1.26
I_Prob: 0.03

YDES - Uncharacterized fimbrial-like protein YdeS
Paralog alert: 0.95 [within 20: 0.80] - ratio of genomes with paralogs
Cluster includes: ELFA FIMA1 FIMF FIMG FIMI SFMA SFMF YADN YBGD YCBU YCBV YDER YDES YFCP YFCV YGIL YRAH
YDET - Putative uncharacterized protein ydet
Paralog alert: 0.76 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: YDET
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
160_V 155_V 1.42 0.03
48_T 47_T 1.26 0.02
167_A 215_G 1.11 0.01
107_S 155_V 1.10 0.01
73_I 4_Y 1.09 0.01
173_L 40_Q 1.07 0.01
169_A 182_G 1.06 0.01
46_N 30_R 1.06 0.01
164_L 235_I 1.05 0.01
63_G 131_L 1.04 0.01
62_T 233_V 1.01 0.01
108_N 96_H 1.00 0.01
125_V 382_R 0.99 0.01
71_F 237_N 0.99 0.01
71_F 42_G 0.99 0.01
122_M 214_F 0.98 0.01
162_P 93_D 0.97 0.01
49_V 100_F 0.95 0.01
158_K 225_V 0.93 0.01
165_V 301_K 0.92 0.01
27_I 230_A 0.91 0.01
56_A 288_A 0.90 0.01
153_L 301_K 0.90 0.01
117_I 294_F 0.89 0.01
70_P 262_V 0.89 0.01
85_V 179_G 0.88 0.01
114_G 146_L 0.88 0.01
35_D 149_N 0.88 0.01
103_L 221_T 0.87 0.01
166_R 102_L 0.87 0.01
115_I 178_R 0.87 0.01
63_G 272_N 0.87 0.01
114_G 332_E 0.85 0.01
49_V 92_N 0.85 0.01
39_T 349_V 0.85 0.01
131_H 283_I 0.84 0.01
169_A 232_N 0.84 0.01
73_I 30_R 0.84 0.01
128_N 271_D 0.84 0.01
100_L 223_V 0.82 0.00
85_V 269_L 0.82 0.00
149_Y 38_S 0.82 0.00
40_V 220_D 0.81 0.00
149_Y 77_I 0.81 0.00
78_C 299_G 0.81 0.00
170_T 274_E 0.81 0.00
119_D 152_N 0.81 0.00
125_V 205_I 0.81 0.00
146_I 186_V 0.80 0.00
81_G 289_I 0.80 0.00
167_A 308_Y 0.80 0.00
167_A 184_T 0.80 0.00
148_P 38_S 0.80 0.00
176_Q 30_R 0.80 0.00
62_T 71_N 0.80 0.00
33_V 350_S 0.80 0.00
46_N 48_F 0.80 0.00
115_I 273_V 0.79 0.00
55_S 249_A 0.79 0.00
106_G 249_A 0.79 0.00
111_S 358_N 0.78 0.00
72_Q 161_H 0.78 0.00
26_V 4_Y 0.78 0.00
36_Y 215_G 0.78 0.00
27_I 81_L 0.78 0.00
65_T 186_V 0.78 0.00
81_G 207_A 0.77 0.00
162_P 2_S 0.77 0.00
24_D 207_A 0.77 0.00
113_L 330_V 0.76 0.00
128_N 66_I 0.76 0.00
167_A 229_G 0.76 0.00
114_G 123_A 0.76 0.00
43_D 140_G 0.76 0.00
36_Y 220_D 0.76 0.00
71_F 272_N 0.76 0.00
24_D 152_N 0.76 0.00
66_S 354_D 0.76 0.00
95_A 309_G 0.75 0.00
77_E 6_V 0.75 0.00
27_I 220_D 0.75 0.00
77_E 320_T 0.75 0.00
165_V 220_D 0.75 0.00
92_I 361_V 0.75 0.00
123_R 219_G 0.75 0.00
90_N 229_G 0.74 0.00
39_T 50_S 0.74 0.00
76_S 225_V 0.74 0.00
112_G 84_S 0.74 0.00
108_N 322_G 0.74 0.00
111_S 49_F 0.74 0.00
86_R 214_F 0.74 0.00
40_V 355_K 0.73 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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