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OPENSEQ.org

YFHR - YIDA
UniProt: P77538 - P0A8Y5
Length: 554
Sequences: 328
Seq/Len: 0.66
I_Prob: 0.00

YFHR - Uncharacterized protein YfhR
Paralog alert: 0.71 [within 20: 0.06] - ratio of genomes with paralogs
Cluster includes: BIOH DLHH MENH MHPC PLDB RUTD YBFF YCJY YFHR YGHX YJFP
YIDA - Sugar phosphatase YidA
Paralog alert: 0.74 [within 20: 0.18] - ratio of genomes with paralogs
Cluster includes: COF MPGP SUPH YBHA YBJI YIDA YIGL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
56_A 209_G 1.24 0.00
81_I 240_A 1.09 0.00
213_S 266_K 1.09 0.00
85_H 236_A 1.08 0.00
219_L 7_A 1.05 0.00
81_I 91_D 1.04 0.00
50_E 211_K 1.00 0.00
276_I 232_G 0.99 0.00
152_L 40_V 0.99 0.00
193_M 228_I 0.98 0.00
175_R 99_L 0.95 0.00
54_F 89_S 0.95 0.00
249_I 96_L 0.94 0.00
227_D 168_A 0.93 0.00
252_P 37_V 0.92 0.00
54_F 91_D 0.91 0.00
106_F 211_K 0.91 0.00
278_S 34_A 0.91 0.00
275_F 151_F 0.91 0.00
272_M 204_L 0.90 0.00
252_P 225_I 0.89 0.00
152_L 188_L 0.88 0.00
139_V 244_V 0.88 0.00
162_I 21_I 0.87 0.00
80_T 83_V 0.86 0.00
227_D 99_L 0.86 0.00
80_T 36_G 0.86 0.00
200_L 196_N 0.85 0.00
245_P 242_P 0.85 0.00
94_H 200_G 0.85 0.00
59_G 83_V 0.84 0.00
149_R 5_L 0.84 0.00
208_E 126_T 0.84 0.00
243_K 4_K 0.84 0.00
58_D 202_K 0.83 0.00
167_G 201_V 0.83 0.00
59_G 244_V 0.83 0.00
267_V 251_V 0.83 0.00
204_S 228_I 0.82 0.00
221_L 48_A 0.82 0.00
64_G 244_V 0.82 0.00
172_E 151_F 0.81 0.00
231_P 105_S 0.81 0.00
159_G 183_S 0.81 0.00
224_G 16_L 0.80 0.00
136_I 34_A 0.79 0.00
87_N 68_T 0.79 0.00
227_D 106_H 0.79 0.00
81_I 194_R 0.78 0.00
154_G 240_A 0.78 0.00
247_R 21_I 0.78 0.00
152_L 23_P 0.78 0.00
131_D 14_L 0.78 0.00
253_D 195_V 0.78 0.00
201_L 235_V 0.78 0.00
209_N 35_R 0.78 0.00
115_G 191_L 0.77 0.00
55_T 225_I 0.77 0.00
274_D 26_K 0.77 0.00
162_I 98_K 0.76 0.00
254_G 70_N 0.76 0.00
228_H 162_I 0.76 0.00
183_F 46_P 0.76 0.00
225_K 159_E 0.76 0.00
233_Q 27_N 0.76 0.00
69_S 206_D 0.76 0.00
270_E 94_R 0.75 0.00
191_N 58_H 0.75 0.00
272_M 269_L 0.75 0.00
154_G 93_Y 0.75 0.00
202_D 37_V 0.75 0.00
95_W 185_P 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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