May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

SUFS - TAM
UniProt: P77444 - P76145
Length: 658
Sequences: 883
Seq/Len: 1.45
I_Prob: 0.00

SUFS - Cysteine desulfurase
Paralog alert: 0.93 [within 20: 0.47] - ratio of genomes with paralogs
Cluster includes: AAT ALAA ALAC ARNB AVTA CSDA HIS8 ISCS MALY RFFA SERC SUFS TYRB YBDL YDCR YJIR
TAM - Trans-aconitate 2-methyltransferase
Paralog alert: 0.61 [within 20: 0.04] - ratio of genomes with paralogs
Cluster includes: BIOC CMOA SMTA TAM TEHB UBIE UBIG YAFE YJHP
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
102_A 126_L 1.00 0.00
375_P 58_I 0.96 0.00
142_R 121_N 0.94 0.00
212_V 12_F 0.93 0.00
389_E 36_A 0.92 0.00
356_I 126_L 0.91 0.00
389_E 223_Q 0.90 0.00
194_G 250_R 0.90 0.00
240_E 123_Q 0.89 0.00
242_L 97_I 0.88 0.00
309_L 27_V 0.88 0.00
360_T 83_A 0.87 0.00
80_I 38_L 0.86 0.00
220_Y 147_W 0.85 0.00
165_T 58_I 0.83 0.00
100_L 103_L 0.83 0.00
319_S 34_Y 0.82 0.00
304_E 162_V 0.81 0.00
122_E 239_L 0.81 0.00
337_F 163_H 0.81 0.00
354_Y 65_P 0.80 0.00
337_F 31_N 0.79 0.00
194_G 64_S 0.79 0.00
295_S 123_Q 0.79 0.00
353_N 234_N 0.79 0.00
188_T 92_Q 0.76 0.00
380_A 20_A 0.75 0.00
335_I 174_C 0.75 0.00
391_V 235_G 0.74 0.00
104_S 35_V 0.74 0.00
353_N 51_Q 0.74 0.00
343_H 90_P 0.74 0.00
212_V 79_Q 0.74 0.00
244_Q 123_Q 0.74 0.00
389_E 192_A 0.74 0.00
111_R 30_E 0.73 0.00
291_L 82_E 0.73 0.00
153_Q 120_L 0.73 0.00
118_I 239_L 0.73 0.00
158_P 224_M 0.73 0.00
191_H 18_R 0.73 0.00
284_I 68_I 0.73 0.00
48_R 107_P 0.73 0.00
231_T 102_S 0.73 0.00
68_K 19_P 0.72 0.00
53_A 15_E 0.72 0.00
48_R 72_R 0.72 0.00
248_P 38_L 0.72 0.00
238_V 204_P 0.71 0.00
46_F 102_S 0.71 0.00
381_S 85_I 0.71 0.00
219_F 187_M 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.4137 seconds.