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OPENSEQ.org

MURR - PTGA
UniProt: P77245 - P69783
Length: 454
Sequences: 270
Seq/Len: 0.63
I_Prob: 0.00

MURR - HTH-type transcriptional regulator MurR
Paralog alert: 0.77 [within 20: 0.09] - ratio of genomes with paralogs
Cluster includes: HEXR MURR RPIR YFHH
PTGA - Glucose-specific phosphotransferase enzyme IIA component
Paralog alert: 0.76 [within 20: 0.05] - ratio of genomes with paralogs
Cluster includes: PTGA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
258_L 140_V 1.44 0.00
21_I 110_E 1.14 0.00
153_L 74_T 1.08 0.00
28_N 75_N 1.08 0.00
254_V 43_A 1.05 0.00
63_F 108_A 1.05 0.00
202_A 62_A 1.01 0.00
37_S 88_L 0.99 0.00
213_I 58_N 0.98 0.00
66_L 56_T 0.98 0.00
254_V 95_D 0.97 0.00
228_H 141_I 0.96 0.00
187_I 66_G 0.95 0.00
125_L 106_R 0.94 0.00
21_I 84_S 0.94 0.00
59_G 94_I 0.94 0.00
182_K 47_V 0.92 0.00
213_I 44_E 0.91 0.00
212_V 70_K 0.91 0.00
246_S 60_M 0.90 0.00
63_F 84_S 0.89 0.00
56_Q 118_D 0.89 0.00
55_A 25_A 0.88 0.00
187_I 112_Q 0.88 0.00
30_S 43_A 0.88 0.00
51_I 123_F 0.88 0.00
44_L 137_T 0.87 0.00
41_A 134_S 0.87 0.00
223_L 117_G 0.87 0.00
113_L 154_S 0.86 0.00
25_L 128_L 0.85 0.00
138_I 61_V 0.85 0.00
213_I 67_T 0.85 0.00
65_E 87_E 0.84 0.00
164_V 94_I 0.84 0.00
36_S 56_T 0.84 0.00
134_K 139_V 0.84 0.00
37_S 58_N 0.83 0.00
149_V 134_S 0.83 0.00
228_H 88_L 0.83 0.00
196_K 99_L 0.83 0.00
4_L 60_M 0.82 0.00
130_E 115_K 0.82 0.00
190_S 75_N 0.82 0.00
36_S 132_A 0.81 0.00
125_L 139_V 0.81 0.00
7_I 27_L 0.81 0.00
64_T 47_V 0.81 0.00
61_Q 88_L 0.80 0.00
3_Y 82_S 0.80 0.00
62_G 52_A 0.80 0.00
14_F 55_P 0.80 0.00
135_A 74_T 0.80 0.00
241_R 78_F 0.79 0.00
223_L 83_D 0.79 0.00
178_Q 92_F 0.78 0.00
16_E 44_E 0.78 0.00
138_I 140_V 0.78 0.00
135_A 114_V 0.78 0.00
248_R 62_A 0.77 0.00
28_N 78_F 0.77 0.00
209_G 109_E 0.77 0.00
154_S 105_K 0.77 0.00
258_L 145_D 0.76 0.00
123_A 33_N 0.76 0.00
131_V 43_A 0.76 0.00
205_A 56_T 0.76 0.00
18_E 126_P 0.76 0.00
115_Q 58_N 0.76 0.00
46_I 49_D 0.76 0.00
14_F 160_G 0.76 0.00
150_G 53_I 0.75 0.00
51_I 120_V 0.75 0.00
19_Q 81_E 0.75 0.00
147_A 95_D 0.75 0.00
63_F 53_I 0.74 0.00
132_I 86_V 0.74 0.00
26_Q 27_L 0.74 0.00
57_K 78_F 0.74 0.00
67_R 106_R 0.74 0.00
238_T 92_F 0.74 0.00
222_P 88_L 0.74 0.00
118_A 34_I 0.73 0.00
32_L 90_V 0.73 0.00
254_V 25_A 0.73 0.00
216_T 94_I 0.73 0.00
1_M 137_T 0.73 0.00
135_A 83_D 0.73 0.00
240_W 61_V 0.73 0.00
262_L 46_I 0.73 0.00
137_F 53_I 0.72 0.00
164_V 121_I 0.72 0.00
102_A 142_S 0.72 0.00
41_A 119_T 0.72 0.00
113_L 157_V 0.71 0.00
132_I 41_V 0.71 0.00
260_V 23_I 0.71 0.00
158_M 74_T 0.71 0.00
133_S 74_T 0.71 0.00
161_G 46_I 0.71 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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