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OPENSEQ.org

EUTD - TDCD
UniProt: P77218 - P11868
Length: 740
Sequences: 855
Seq/Len: 1.20
I_Prob: 0.00

EUTD - Ethanolamine utilization protein EutD
Paralog alert: 0.45 [within 20: 0.15] - ratio of genomes with paralogs
Cluster includes: EUTD
TDCD - Propionate kinase
Paralog alert: 0.42 [within 20: 0.02] - ratio of genomes with paralogs
Cluster includes: ACKA TDCD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
57_S 101_T 1.15 0.00
222_T 10_I 1.12 0.00
174_T 277_S 1.05 0.00
249_A 349_I 0.99 0.00
87_R 359_S 0.97 0.00
3_I 237_S 0.93 0.00
33_Y 200_V 0.91 0.00
128_A 290_H 0.91 0.00
211_R 266_E 0.90 0.00
82_H 288_E 0.90 0.00
107_A 349_I 0.90 0.00
198_R 240_V 0.89 0.00
188_T 7_V 0.88 0.00
180_D 201_V 0.87 0.00
114_G 199_L 0.86 0.00
164_F 67_I 0.86 0.00
105_M 325_G 0.85 0.00
51_L 219_V 0.84 0.00
110_M 100_I 0.83 0.00
284_G 98_A 0.83 0.00
3_I 308_I 0.82 0.00
39_L 105_I 0.81 0.00
32_Q 318_L 0.81 0.00
272_A 392_L 0.81 0.00
91_K 359_S 0.81 0.00
103_P 361_G 0.80 0.00
163_G 367_S 0.79 0.00
59_G 58_H 0.79 0.00
30_A 220_D 0.79 0.00
266_V 28_E 0.79 0.00
198_R 282_L 0.79 0.00
68_I 287_H 0.79 0.00
135_L 237_S 0.79 0.00
76_M 371_R 0.79 0.00
79_E 353_M 0.79 0.00
92_T 366_S 0.79 0.00
285_G 310_G 0.78 0.00
297_A 374_C 0.78 0.00
143_G 325_G 0.78 0.00
43_I 217_Q 0.78 0.00
78_E 348_E 0.78 0.00
130_V 384_M 0.78 0.00
11_L 159_L 0.78 0.00
126_S 163_Y 0.77 0.00
11_L 266_E 0.77 0.00
90_E 97_S 0.76 0.00
60_V 123_L 0.76 0.00
55_A 280_R 0.76 0.00
277_Y 225_M 0.76 0.00
277_Y 173_G 0.76 0.00
131_L 21_V 0.76 0.00
101_T 360_C 0.76 0.00
277_Y 146_F 0.76 0.00
17_V 380_N 0.76 0.00
310_Q 135_G 0.75 0.00
155_P 122_N 0.75 0.00
49_F 196_D 0.74 0.00
229_A 165_E 0.74 0.00
89_G 361_G 0.74 0.00
234_V 387_L 0.74 0.00
300_M 42_N 0.73 0.00
103_P 384_M 0.73 0.00
168_S 35_A 0.73 0.00
249_A 71_L 0.73 0.00
234_V 83_I 0.73 0.00
48_P 73_K 0.72 0.00
261_K 287_H 0.72 0.00
144_C 181_Y 0.72 0.00
308_S 201_V 0.72 0.00
79_E 96_E 0.72 0.00
75_A 165_E 0.72 0.00
27_V 12_C 0.71 0.00
63_D 240_V 0.71 0.00
38_G 123_L 0.71 0.00
36_Q 287_H 0.71 0.00
135_L 17_I 0.71 0.00
300_M 105_I 0.70 0.00
72_G 73_K 0.70 0.00
63_D 101_T 0.70 0.00
163_G 159_L 0.70 0.00
22_A 273_S 0.70 0.00
67_V 106_D 0.70 0.00
69_D 134_P 0.70 0.00
107_A 65_K 0.70 0.00
48_P 101_T 0.69 0.00
153_M 191_N 0.69 0.00
169_V 316_R 0.69 0.00
200_A 154_A 0.69 0.00
138_I 239_D 0.69 0.00
93_P 353_M 0.69 0.00
57_S 390_I 0.69 0.00
189_W 221_T 0.68 0.00
79_E 167_L 0.68 0.00
155_P 325_G 0.68 0.00
250_A 343_A 0.68 0.00
28_L 244_A 0.68 0.00
249_A 73_K 0.68 0.00
143_G 334_I 0.68 0.00
39_L 96_E 0.68 0.00
173_P 11_N 0.67 0.00
244_F 98_A 0.67 0.00
249_A 122_N 0.67 0.00
211_R 275_L 0.67 0.00
138_I 304_I 0.67 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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