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OPENSEQ.org

CUSC - CUSS
UniProt: P77211 - P77485
Length: 937
Sequences: 719
Seq/Len: 0.79
I_Prob: 0.00

CUSC - Cation efflux system protein CusC
Paralog alert: 0.84 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: CUSC MDTP MDTQ TOLC
CUSS - Sensor kinase CusS
Paralog alert: 0.78 [within 20: 0.11] - ratio of genomes with paralogs
Cluster includes: ATOS BAES BASS CPXA CREC CUSS DCUS DPIB ENVZ GLRK NTRB PHOQ PHOR QSEC RSTB YEDV ZRAS
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
409_R 397_I 1.40 0.00
435_T 97_T 0.94 0.00
338_I 211_A 0.91 0.00
335_I 427_L 0.89 0.00
198_A 98_V 0.87 0.00
102_L 211_A 0.84 0.00
361_Q 432_Y 0.84 0.00
102_L 477_T 0.83 0.00
223_S 241_L 0.82 0.00
225_R 192_S 0.82 0.00
342_I 93_S 0.82 0.00
440_N 427_L 0.82 0.00
94_T 434_V 0.81 0.00
433_R 311_M 0.80 0.00
169_V 308_L 0.79 0.00
439_L 219_Q 0.79 0.00
295_A 11_S 0.79 0.00
183_L 30_A 0.78 0.00
377_V 223_I 0.78 0.00
213_A 322_A 0.77 0.00
396_R 476_I 0.77 0.00
398_L 170_A 0.75 0.00
201_E 247_S 0.75 0.00
388_N 397_I 0.75 0.00
224_T 228_L 0.75 0.00
85_Q 397_I 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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