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OPENSEQ.org

YFCQ - YRAH
UniProt: P76500 - P42913
Length: 356
Sequences: 203
Seq/Len: 0.60
I_Prob: 0.00

YFCQ - Uncharacterized fimbrial-like protein YfcQ
Paralog alert: 0.80 [within 20: 0.35] - ratio of genomes with paralogs
Cluster includes: YFCQ YFCR
YRAH - Uncharacterized fimbrial-like protein YraH
Paralog alert: 0.93 [within 20: 0.77] - ratio of genomes with paralogs
Cluster includes: ELFA FIMA1 FIMF FIMG FIMI SFMA SFMF YADN YBGD YCBU YCBV YDER YDES YFCP YFCV YGIL YRAH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
38_S 141_L 1.44 0.00
55_I 130_I 1.35 0.00
138_P 70_P 1.23 0.00
137_V 112_L 1.09 0.00
155_A 132_D 1.08 0.00
100_D 127_G 1.08 0.00
146_L 136_G 1.08 0.00
37_I 89_N 1.04 0.00
105_G 51_L 1.01 0.00
134_L 127_G 1.00 0.00
67_E 54_Y 0.95 0.00
159_V 127_G 0.95 0.00
108_L 143_A 0.95 0.00
50_L 73_I 0.93 0.00
55_I 63_G 0.93 0.00
115_F 189_V 0.92 0.00
106_I 92_A 0.90 0.00
83_L 115_V 0.89 0.00
45_V 43_S 0.88 0.00
62_K 134_E 0.86 0.00
29_L 131_D 0.85 0.00
52_I 161_V 0.85 0.00
83_L 76_V 0.85 0.00
108_L 109_F 0.84 0.00
46_E 127_G 0.84 0.00
94_D 66_S 0.82 0.00
129_T 163_V 0.81 0.00
67_E 142_N 0.81 0.00
49_D 122_A 0.80 0.00
130_Q 59_F 0.80 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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