May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

FLGD - FLGF
UniProt: P75936 - P75938
Length: 482
Sequences: 377
Seq/Len: 0.84
I_Prob: 0.10

FLGD - Basal-body rod modification protein FlgD
Paralog alert: 0.14 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: FLGD
FLGF - Flagellar basal-body rod protein FlgF
Paralog alert: 0.88 [within 20: 0.56] - ratio of genomes with paralogs
Cluster includes: FLGE FLGF FLGG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
39_L 241_A 1.71 0.10
40_V 23_A 1.64 0.08
40_V 233_V 1.41 0.04
36_L 114_T 1.33 0.03
69_G 217_M 1.28 0.03
47_D 225_R 1.28 0.03
49_T 160_R 1.25 0.03
88_Q 217_M 1.21 0.02
187_N 108_D 1.15 0.02
220_G 179_F 1.13 0.02
228_R 227_F 1.09 0.02
54_N 216_A 1.09 0.02
214_L 53_T 1.09 0.01
96_I 76_R 1.06 0.01
181_V 23_A 1.04 0.01
104_G 7_T 1.04 0.01
70_I 217_M 1.04 0.01
162_F 63_G 1.03 0.01
67_V 75_S 1.03 0.01
34_S 30_S 1.03 0.01
127_E 30_S 1.02 0.01
58_T 7_T 1.01 0.01
47_D 238_D 1.01 0.01
139_I 176_D 0.99 0.01
94_N 138_A 0.99 0.01
96_I 6_Y 0.98 0.01
225_D 182_S 0.98 0.01
152_I 218_S 0.98 0.01
32_Q 247_L 0.97 0.01
189_G 8_A 0.97 0.01
83_Q 26_L 0.97 0.01
94_N 163_L 0.97 0.01
163_T 100_T 0.96 0.01
73_L 218_S 0.96 0.01
166_G 15_T 0.96 0.01
64_I 7_T 0.96 0.01
83_Q 232_K 0.95 0.01
80_I 221_I 0.95 0.01
225_D 82_L 0.95 0.01
229_Q 163_L 0.95 0.01
45_N 30_S 0.95 0.01
189_G 158_V 0.94 0.01
133_D 102_N 0.94 0.01
156_T 113_L 0.94 0.01
164_W 221_I 0.94 0.01
223_T 62_P 0.93 0.01
139_I 129_V 0.93 0.01
194_A 133_A 0.93 0.01
121_T 57_V 0.92 0.01
41_A 22_T 0.92 0.01
216_L 93_A 0.91 0.01
214_L 246_Q 0.90 0.01
216_L 145_A 0.90 0.01
146_V 181_L 0.90 0.01
191_Q 108_D 0.89 0.01
59_S 212_N 0.89 0.01
197_L 66_M 0.89 0.01
134_K 184_E 0.89 0.01
67_V 194_Q 0.89 0.01
216_L 76_R 0.89 0.01
44_K 58_T 0.88 0.01
36_L 155_V 0.88 0.01
94_N 148_P 0.88 0.01
206_I 107_V 0.88 0.01
54_N 26_L 0.87 0.01
216_L 36_A 0.86 0.01
43_L 212_N 0.86 0.01
37_T 138_A 0.85 0.01
150_I 90_V 0.85 0.01
57_L 26_L 0.85 0.01
38_L 206_L 0.85 0.01
147_V 68_P 0.85 0.01
148_R 83_Q 0.85 0.01
37_T 181_L 0.85 0.01
155_L 129_V 0.84 0.01
111_T 20_A 0.84 0.01
189_G 163_L 0.84 0.01
167_T 201_V 0.84 0.01
61_L 37_Q 0.84 0.01
57_L 208_G 0.84 0.01
64_I 18_Q 0.84 0.01
29_A 108_D 0.84 0.01
131_A 173_R 0.84 0.01
64_I 155_V 0.84 0.01
137_A 109_P 0.83 0.01
165_D 129_V 0.83 0.01
84_I 8_A 0.83 0.01
86_N 129_V 0.82 0.01
54_N 218_S 0.82 0.01
58_T 29_A 0.82 0.01
81_S 130_P 0.82 0.01
226_E 203_S 0.82 0.01
146_V 81_A 0.82 0.01
165_D 241_A 0.82 0.01
58_T 16_L 0.81 0.01
70_I 218_S 0.81 0.01
40_V 119_P 0.81 0.01
57_L 214_V 0.81 0.01
40_V 122_G 0.81 0.01
169_T 221_I 0.80 0.01
203_Q 24_S 0.80 0.01
151_D 216_A 0.80 0.01
47_D 13_S 0.80 0.01
227_V 8_A 0.80 0.01
139_I 108_D 0.80 0.01
68_S 102_N 0.79 0.01
44_K 216_A 0.79 0.01
69_G 15_T 0.79 0.01
107_V 133_A 0.79 0.01
126_V 161_L 0.79 0.01
83_Q 130_P 0.79 0.01
26_S 62_P 0.79 0.01
230_I 214_V 0.79 0.01
40_V 189_R 0.79 0.01
134_K 136_T 0.79 0.01
34_S 8_A 0.78 0.01
174_A 154_T 0.78 0.01
216_L 91_Q 0.78 0.01
151_D 129_V 0.78 0.01
182_A 32_P 0.78 0.01
94_N 176_D 0.78 0.01
52_M 167_T 0.77 0.01
176_N 125_G 0.77 0.01
109_A 139_A 0.77 0.01
54_N 15_T 0.77 0.01
185_A 182_S 0.77 0.01
81_S 8_A 0.77 0.01
86_N 27_A 0.76 0.01
41_A 23_A 0.76 0.01
171_G 35_R 0.76 0.01
165_D 79_D 0.76 0.01
225_D 206_L 0.76 0.01
131_A 145_A 0.76 0.00
135_V 152_A 0.76 0.00
174_A 53_T 0.76 0.00
179_Y 122_G 0.76 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 1.2524 seconds.