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OPENSEQ.org

HDA - THIL
UniProt: P69931 - P0AGG0
Length: 558
Sequences: 330
Seq/Len: 0.64
I_Prob: 0.00

HDA - DnaA regulatory inactivator Hda
Paralog alert: 0.41 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: HDA
THIL - Thiamine-monophosphate kinase
Paralog alert: 0.79 [within 20: 0.16] - ratio of genomes with paralogs
Cluster includes: HYPE SELD THIL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
29_S 76_L 1.48 0.00
57_S 178_A 1.29 0.00
57_S 188_K 1.29 0.00
21_S 46_T 1.24 0.00
152_S 244_A 1.19 0.00
22_F 268_C 1.17 0.00
56_R 66_Y 1.16 0.00
213_R 60_D 1.14 0.00
172_Q 157_V 1.13 0.00
34_L 64_L 1.10 0.00
132_L 196_R 1.10 0.00
217_T 221_L 1.09 0.00
151_A 126_G 1.08 0.00
110_D 58_D 1.08 0.00
224_I 238_L 1.08 0.00
56_R 257_W 1.07 0.00
58_H 245_L 1.06 0.00
165_L 140_M 1.05 0.00
101_I 221_L 1.05 0.00
124_I 196_R 1.04 0.00
192_F 60_D 1.04 0.00
108_A 156_Y 1.03 0.00
53_G 33_L 1.02 0.00
148_P 72_N 1.00 0.00
181_R 117_Q 1.00 0.00
121_Y 175_L 1.00 0.00
124_I 41_T 1.00 0.00
230_I 187_I 0.99 0.00
11_L 108_F 0.99 0.00
226_F 209_S 0.99 0.00
22_F 38_E 0.99 0.00
20_A 284_G 0.99 0.00
200_E 140_M 0.98 0.00
76_Y 251_P 0.98 0.00
201_M 270_T 0.97 0.00
217_T 252_E 0.96 0.00
119_D 140_M 0.96 0.00
214_A 36_I 0.94 0.00
101_I 217_L 0.94 0.00
11_L 171_L 0.94 0.00
172_Q 202_A 0.93 0.00
123_R 296_M 0.93 0.00
24_P 44_I 0.93 0.00
164_P 108_F 0.93 0.00
177_R 22_D 0.92 0.00
214_A 92_L 0.92 0.00
102_D 296_M 0.92 0.00
197_L 22_D 0.92 0.00
209_D 269_F 0.91 0.00
48_L 54_H 0.91 0.00
214_A 119_I 0.91 0.00
60_L 100_L 0.91 0.00
10_P 104_S 0.91 0.00
124_I 104_S 0.91 0.00
127_S 209_S 0.90 0.00
181_R 137_F 0.90 0.00
215_S 158_T 0.90 0.00
57_S 260_S 0.90 0.00
93_M 203_L 0.90 0.00
187_E 173_N 0.89 0.00
168_E 276_R 0.89 0.00
11_L 60_D 0.89 0.00
136_G 143_A 0.88 0.00
154_L 224_I 0.88 0.00
216_I 78_A 0.87 0.00
46_I 252_E 0.87 0.00
131_R 77_A 0.87 0.00
105_E 289_P 0.87 0.00
15_D 142_R 0.86 0.00
21_S 209_S 0.86 0.00
200_E 24_E 0.86 0.00
4_P 244_A 0.86 0.00
181_R 224_I 0.86 0.00
165_L 112_N 0.86 0.00
208_L 146_R 0.85 0.00
168_E 157_V 0.84 0.00
29_S 275_N 0.84 0.00
176_L 191_L 0.84 0.00
18_T 209_S 0.84 0.00
127_S 114_Y 0.84 0.00
105_E 228_S 0.84 0.00
216_I 130_M 0.84 0.00
27_N 158_T 0.83 0.00
119_D 119_I 0.83 0.00
100_C 25_L 0.83 0.00
143_L 64_L 0.83 0.00
26_D 204_R 0.83 0.00
158_Q 174_R 0.83 0.00
164_P 36_I 0.83 0.00
60_L 103_F 0.83 0.00
48_L 150_K 0.82 0.00
25_G 276_R 0.82 0.00
168_E 178_A 0.82 0.00
122_N 186_L 0.82 0.00
209_D 156_Y 0.82 0.00
174_L 247_R 0.82 0.00
23_W 265_Y 0.81 0.00
228_K 217_L 0.81 0.00
148_P 92_L 0.81 0.00
18_T 58_D 0.81 0.00
157_G 219_S 0.81 0.00
11_L 109_D 0.81 0.00
193_L 114_Y 0.81 0.00
48_L 268_C 0.81 0.00
134_I 240_P 0.81 0.00
74_V 187_I 0.81 0.00
208_L 155_I 0.81 0.00
178_A 45_S 0.80 0.00
57_S 25_L 0.80 0.00
98_L 25_L 0.80 0.00
104_I 154_W 0.80 0.00
62_A 97_E 0.80 0.00
52_E 265_Y 0.80 0.00
10_P 102_S 0.80 0.00
28_S 185_Y 0.80 0.00
228_K 108_F 0.79 0.00
168_E 148_G 0.79 0.00
227_V 77_A 0.79 0.00
224_I 134_I 0.79 0.00
207_T 98_A 0.79 0.00
57_S 265_Y 0.79 0.00
208_L 138_V 0.78 0.00
184_E 64_L 0.78 0.00
10_P 76_L 0.78 0.00
215_S 168_L 0.78 0.00
121_Y 246_S 0.78 0.00
93_M 27_I 0.78 0.00
5_A 208_N 0.78 0.00
219_Q 250_E 0.78 0.00
232_K 17_R 0.78 0.00
158_Q 257_W 0.78 0.00
144_N 104_S 0.78 0.00
202_R 199_Q 0.77 0.00
128_G 21_L 0.77 0.00
49_W 26_G 0.77 0.00
162_L 173_N 0.77 0.00
204_L 112_N 0.77 0.00
98_L 96_D 0.77 0.00
213_R 276_R 0.77 0.00
19_F 190_H 0.77 0.00
18_T 173_N 0.77 0.00
7_L 54_H 0.77 0.00
160_Y 143_A 0.77 0.00
219_Q 234_I 0.77 0.00
200_E 76_L 0.77 0.00
152_S 163_D 0.77 0.00
227_V 191_L 0.76 0.00
218_A 191_L 0.76 0.00
174_L 272_P 0.76 0.00
60_L 44_I 0.76 0.00
120_L 187_I 0.76 0.00
186_P 16_V 0.76 0.00
125_L 54_H 0.76 0.00
206_M 207_A 0.76 0.00
64_C 292_C 0.76 0.00
102_D 55_F 0.76 0.00
71_G 278_A 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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