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OPENSEQ.org

CCME - NRFG
UniProt: P69490 - P32712
Length: 357
Sequences: 276
Seq/Len: 0.83
I_Prob: 0.00

CCME - Cytochrome c-type biogenesis protein CcmE
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: CCME
NRFG - Formate-dependent nitrite reductase complex subunit NrfG
Paralog alert: 0.49 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: NRFG
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
32_S 187_I 1.33 0.00
115_L 187_I 1.29 0.00
112_Q 186_S 1.24 0.00
18_G 80_G 1.24 0.00
68_P 116_V 1.20 0.00
34_I 133_I 1.20 0.00
62_V 129_T 1.19 0.00
106_G 117_L 1.19 0.00
80_V 160_Y 1.19 0.00
142_A 154_A 1.17 0.00
71_V 120_Q 1.16 0.00
21_L 101_Q 1.15 0.00
30_L 150_L 1.15 0.00
21_L 52_Q 1.14 0.00
36_L 112_A 1.12 0.00
53_M 22_C 1.12 0.00
5_R 148_M 1.12 0.00
18_G 149_L 1.11 0.00
11_I 136_A 1.07 0.00
28_Y 80_G 1.07 0.00
83_T 80_G 1.07 0.00
73_R 76_W 1.07 0.00
31_R 110_Y 1.06 0.00
85_Y 141_S 1.06 0.00
59_R 104_G 1.06 0.00
125_E 102_L 1.06 0.00
112_Q 132_M 1.05 0.00
139_V 81_E 1.05 0.00
36_L 148_M 1.04 0.00
117_K 172_D 1.04 0.00
87_A 83_Y 1.03 0.00
77_S 115_T 1.03 0.00
137_P 149_L 1.03 0.00
84_I 39_Y 1.03 0.00
104_R 72_N 1.02 0.00
133_N 126_T 1.02 0.00
93_V 66_I 1.02 0.00
18_G 133_I 1.02 0.00
3_I 187_I 1.02 0.00
36_L 145_T 1.01 0.00
84_I 12_T 1.01 0.00
111_V 111_A 1.01 0.00
133_N 76_W 1.00 0.00
11_I 131_A 1.00 0.00
118_G 101_Q 0.99 0.00
57_G 20_F 0.99 0.00
17_A 128_Q 0.99 0.00
17_A 109_L 0.99 0.00
129_K 116_V 0.99 0.00
126_V 70_P 0.99 0.00
16_L 92_S 0.98 0.00
34_I 86_Q 0.98 0.00
34_I 87_N 0.98 0.00
58_Q 151_A 0.97 0.00
126_V 95_A 0.97 0.00
39_T 83_Y 0.97 0.00
141_K 90_S 0.96 0.00
140_E 138_A 0.96 0.00
84_I 21_L 0.96 0.00
33_N 149_L 0.96 0.00
129_K 187_I 0.96 0.00
27_L 154_A 0.95 0.00
7_N 75_Q 0.95 0.00
46_G 181_T 0.94 0.00
120_H 189_M 0.94 0.00
112_Q 133_I 0.94 0.00
98_I 69_N 0.94 0.00
33_N 62_L 0.94 0.00
36_L 154_A 0.94 0.00
20_A 135_K 0.94 0.00
60_L 154_A 0.93 0.00
23_I 33_Q 0.93 0.00
111_V 143_E 0.93 0.00
19_L 165_E 0.92 0.00
89_G 122_S 0.91 0.00
62_V 158_A 0.91 0.00
54_P 12_T 0.91 0.00
129_K 59_L 0.91 0.00
141_K 138_A 0.90 0.00
39_T 180_R 0.90 0.00
23_I 186_S 0.90 0.00
26_V 22_C 0.90 0.00
5_R 149_L 0.90 0.00
124_K 104_G 0.90 0.00
17_A 13_T 0.89 0.00
91_V 154_A 0.89 0.00
133_N 100_L 0.89 0.00
61_R 163_A 0.89 0.00
5_R 179_N 0.89 0.00
114_E 150_L 0.89 0.00
98_I 58_Q 0.89 0.00
84_I 146_A 0.89 0.00
33_N 155_F 0.89 0.00
107_Q 78_L 0.89 0.00
36_L 156_M 0.89 0.00
107_Q 150_L 0.88 0.00
139_V 115_T 0.88 0.00
126_V 102_L 0.88 0.00
6_K 152_S 0.88 0.00
138_E 99_A 0.87 0.00
62_V 115_T 0.87 0.00
54_P 190_A 0.87 0.00
139_V 166_L 0.87 0.00
24_G 72_N 0.87 0.00
109_V 125_M 0.87 0.00
99_L 70_P 0.87 0.00
34_I 22_C 0.87 0.00
13_C 106_N 0.87 0.00
107_Q 95_A 0.86 0.00
139_V 150_L 0.86 0.00
95_Y 21_L 0.86 0.00
84_I 142_N 0.86 0.00
31_R 167_W 0.86 0.00
114_E 151_A 0.86 0.00
76_N 25_S 0.85 0.00
5_R 35_V 0.85 0.00
56_V 73_S 0.85 0.00
16_L 184_V 0.85 0.00
76_N 43_R 0.85 0.00
5_R 81_E 0.85 0.00
124_K 88_D 0.84 0.00
41_G 75_Q 0.84 0.00
112_Q 152_S 0.84 0.00
119_N 59_L 0.84 0.00
60_L 60_Q 0.84 0.00
121_I 16_I 0.84 0.00
108_G 117_L 0.84 0.00
8_R 116_V 0.84 0.00
87_A 96_Y 0.84 0.00
111_V 175_S 0.84 0.00
119_N 140_D 0.84 0.00
26_V 96_Y 0.83 0.00
125_E 81_E 0.83 0.00
81_T 102_L 0.83 0.00
80_V 121_A 0.83 0.00
71_V 80_G 0.82 0.00
68_P 49_F 0.82 0.00
115_L 105_E 0.82 0.00
137_P 147_L 0.82 0.00
114_E 28_L 0.82 0.00
111_V 84_L 0.82 0.00
47_K 21_L 0.81 0.00
121_I 56_E 0.81 0.00
140_E 26_Y 0.81 0.00
121_I 136_A 0.81 0.00
14_A 44_D 0.80 0.00
4_R 38_E 0.80 0.00
95_Y 159_N 0.80 0.00
98_I 12_T 0.80 0.00
141_K 101_Q 0.80 0.00
14_A 165_E 0.80 0.00
12_A 44_D 0.80 0.00
112_Q 148_M 0.80 0.00
27_L 100_L 0.80 0.00
12_A 89_Y 0.80 0.00
83_T 98_Q 0.79 0.00
22_T 91_N 0.79 0.00
26_V 69_N 0.79 0.00
118_G 98_Q 0.79 0.00
10_W 104_G 0.79 0.00
126_V 72_N 0.79 0.00
94_S 107_A 0.79 0.00
45_Y 40_Q 0.79 0.00
96_E 25_S 0.78 0.00
42_E 21_L 0.78 0.00
13_C 80_G 0.78 0.00
27_L 193_L 0.78 0.00
19_L 144_I 0.78 0.00
122_L 108_E 0.78 0.00
55_E 183_L 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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