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OPENSEQ.org

MDTI - YNFL
UniProt: P69210 - P77559
Length: 406
Sequences: 676
Seq/Len: 1.72
I_Prob: 0.00

MDTI - Spermidine export protein MdtI
Paralog alert: 0.68 [within 20: 0.29] - ratio of genomes with paralogs
Cluster includes: EMRE MDTI MDTJ SUGE
YNFL - Uncharacterized HTH-type transcriptional regulator YnfL
Paralog alert: 0.87 [within 20: 0.49] - ratio of genomes with paralogs
Cluster includes: AAER ABGR ALLS CBL CYNR CYSB DMLR DSDC GCVA HCAR HDFR ICIA ILVY LEUO LRHA LYSR METR NAC NHAR OXYR PERR TDCA TTDR XAPR YAFC YAHB YBDO YBEF YBHD YCAN YCJZ YDCI YDHB YEEY YEIE YFER YFIE YGFI YHAJ YHJC YIAU YIDZ YJIE YNEJ YNFL
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
84_F 31_Q 0.87 0.00
96_L 148_L 0.85 0.00
67_L 234_G 0.82 0.00
103_M 15_A 0.81 0.00
98_L 255_N 0.80 0.00
57_K 79_D 0.79 0.00
79_A 179_A 0.78 0.00
50_S 5_L 0.73 0.00
42_L 125_L 0.72 0.00
98_L 190_A 0.72 0.00
47_A 184_V 0.72 0.00
80_G 14_V 0.70 0.00
46_L 242_V 0.69 0.00
97_V 146_M 0.68 0.00
55_A 66_F 0.66 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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