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OPENSEQ.org
L28 - L35
UniProt: P60494 - Q5SKU1
Length: 163
Sequences: 975
Seq/Len: 7.62
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d18 3v2f18Contact Map
2j002j0118 2j0318Contact Map
4juw4jux18Contact Map
4kix4kixX3 4kizX3 4kj1X3 4kj3X3Contact Map
4kj54kj5X3 4kj7X3 4kj9X3 4kjbX3Contact Map
2zjr2zjrU3Contact Map
4btc4btd18Contact Map
3uyd3uyeZ8 3uygZ8Contact Map
3v223v2318 3v2518Contact Map
4gd13r8sX3 3r8tX3Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
67_I 52_K 0.84 0.00
19_Q 33_N 0.80 0.00
59_T 15_K 0.79 0.00
38_S 51_A 0.73 0.00
35_T 33_N 0.73 0.00
64_A 24_A 0.71 0.00
70_V 42_R 0.66 0.00
50_R 23_V 0.66 0.00
48_K 7_H 0.65 0.00
68_P 32_L 0.64 0.00
35_T 43_Q 0.64 0.00
64_A 62_L 0.63 0.00
18_I 57_R 0.61 0.00
49_V 49_V 0.60 0.00
20_R 33_N 0.60 0.00
3_K 7_H 0.60 0.00
73_L 22_V 0.58 0.00
71_Y 22_V 0.58 0.00
36_G 23_V 0.58 0.00
60_F 62_L 0.57 0.00
42_Q 11_K 0.56 0.00
19_Q 54_E 0.56 0.00
63_A 10_A 0.55 0.00
15_A 14_V 0.55 0.00
65_S 25_M 0.53 0.00
48_K 56_E 0.53 0.00
41_R 25_M 0.53 0.00
10_K 4_M 0.53 0.00
2_S 64_Y 0.52 0.00
68_P 57_R 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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