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OPENSEQ.org
L28 - L31
UniProt: P60494 - Q5SJE1
Length: 169
Sequences: 1083
Seq/Len: 8.46
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d14 3v2f14Contact Map
2j002j0114 2j0314Contact Map
4juw4jux14Contact Map
4btc4btd14Contact Map
3uyd3uyeZ4 3uygZ4Contact Map
3v223v2314 3v2514Contact Map
3uz63uz8Z4 3uz9Z4Contact Map
3ohc3ohj14 3ohk14Contact Map
3knh3kni14 3knk14Contact Map
3ohy3ohz14 3oi114Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
65_S 34_E 0.78 0.00
74_V 53_E 0.69 0.00
56_Q 35_V 0.68 0.00
66_H 55_R 0.68 0.00
38_S 66_S 0.68 0.00
53_V 36_C 0.67 0.00
12_P 51_D 0.64 0.00
47_Q 2_K 0.62 0.00
53_V 43_Y 0.60 0.00
40_R 58_R 0.60 0.00
2_S 49_F 0.59 0.00
65_S 47_Q 0.58 0.00
65_S 24_T 0.57 0.00
57_E 32_Y 0.57 0.00
17_S 4_G 0.56 0.00
44_P 57_E 0.55 0.00
44_P 51_D 0.55 0.00
50_R 15_I 0.55 0.00
66_H 39_C 0.54 0.00
44_P 62_R 0.54 0.00
39_K 38_K 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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