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OPENSEQ.org
L28 - S14
UniProt: P60494 - Q5SHQ1
Length: 159
Sequences: 909
Seq/Len: 7.27
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cN 3v2d1 3v2eN 3v2f1Contact Map
2j002j00N 2j011 2j02N 2j031Contact Map
4juw4juwN 4jux1Contact Map
3uyd3uydQ 3uyeZ 3uyfQ 3uygZContact Map
3ohc3ohcN 3ohdN 3ohj1 3ohk1Contact Map
3knh3knhN 3kni1 3knjN 3knk1Contact Map
3ohy3ohyN 3ohz1 3oi0N 3oi11Contact Map
3f1e3f1eN 3f1f1 3f1gN 3f1h1Contact Map
3v223v22N 3v231 3v24N 3v251Contact Map
3uz63uz6Q 3uz7Q 3uz8Z 3uz9ZContact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_V 31_R 0.81 0.00
54_A 33_V 0.81 0.00
58_I 18_V 0.80 0.00
10_K 24_C 0.71 0.00
42_Q 49_H 0.71 0.00
64_A 40_C 0.68 0.00
59_T 17_K 0.68 0.00
74_V 49_H 0.68 0.00
64_A 43_C 0.60 0.00
11_R 56_V 0.60 0.00
9_G 48_A 0.58 0.00
42_Q 36_F 0.57 0.00
68_P 31_R 0.57 0.00
51_V 53_L 0.57 0.00
54_A 59_A 0.56 0.00
63_A 48_A 0.55 0.00
10_K 27_C 0.54 0.00
3_K 24_C 0.54 0.00
7_I 48_A 0.54 0.00
55_G 44_L 0.53 0.00
39_K 42_I 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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