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OPENSEQ.org
L28 - L29
UniProt: P60494 - Q5SHP6
Length: 170
Sequences: 1002
Seq/Len: 7.89
I_Prob: 0.05
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d12 3v2f12Contact Map
2j002j0112 2j0312Contact Map
4juw4jux12Contact Map
4kix4kixXY 4kizXY 4kj1XY 4kj3XYContact Map
4kj54kj5XY 4kj7XY 4kj9XY 4kjbXYContact Map
2zjr2zjrUVContact Map
4btc4btd12Contact Map
3uyd3uyeZW 3uygZWContact Map
4gd13r8sXY 3r8tXYContact Map
3knh3kni12 3knk12Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
49_V 47_N 1.03 0.05
74_V 29_K 0.94 0.04
2_S 34_E 0.83 0.03
59_T 70_Q 0.81 0.02
35_T 68_R 0.80 0.02
62_V 52_D 0.67 0.01
44_P 67_K 0.66 0.01
2_S 42_G 0.61 0.01
65_S 31_E 0.58 0.01
47_Q 19_V 0.57 0.01
3_K 26_R 0.57 0.01
59_T 39_A 0.57 0.01
38_S 60_L 0.56 0.01
48_K 68_R 0.56 0.01
2_S 10_L 0.56 0.01
74_V 53_L 0.55 0.01
54_A 55_R 0.55 0.01
59_T 51_R 0.55 0.01
71_Y 43_Q 0.54 0.01
47_Q 32_L 0.54 0.01
57_E 54_K 0.54 0.01
59_T 9_Q 0.54 0.01
74_V 49_K 0.54 0.01
62_V 65_N 0.54 0.01
57_E 24_L 0.54 0.01
47_Q 30_R 0.54 0.01
46_L 25_V 0.51 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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