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OPENSEQ.org
L28 - L32
UniProt: P60494 - P80339
Length: 158
Sequences: 768
Seq/Len: 6.35
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d15 3v2f15Contact Map
2j002j0115 2j0315Contact Map
4juw4jux15Contact Map
4kix4kixX0 4kizX0 4kj1X0 4kj3X0Contact Map
4kj54kj5X0 4kj7X0 4kj9X0 4kjbX0Contact Map
2zjr2zjrUZContact Map
4btc4btd15Contact Map
3uyd3uyeZ5 3uygZ5Contact Map
3v223v2315 3v2515Contact Map
4gd13r8sX0 3r8tX0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
59_T 55_R 0.92 0.01
46_L 13_K 0.85 0.01
68_P 23_H 0.83 0.01
62_V 26_T 0.80 0.01
14_V 12_S 0.78 0.01
69_K 59_E 0.74 0.01
4_V 35_E 0.72 0.01
47_Q 26_T 0.72 0.01
16_N 22_H 0.69 0.01
64_A 25_L 0.67 0.01
2_S 26_T 0.64 0.00
68_P 25_L 0.64 0.00
37_I 8_K 0.63 0.00
42_Q 37_K 0.63 0.00
10_K 32_P 0.62 0.00
15_A 4_H 0.62 0.00
66_H 49_C 0.61 0.00
11_R 15_R 0.60 0.00
47_Q 12_S 0.60 0.00
42_Q 9_K 0.59 0.00
44_P 8_K 0.59 0.00
16_N 18_A 0.59 0.00
69_K 19_R 0.59 0.00
56_Q 55_R 0.59 0.00
35_T 55_R 0.59 0.00
4_V 47_P 0.57 0.00
64_A 28_P 0.57 0.00
75_E 44_T 0.57 0.00
65_S 13_K 0.57 0.00
18_I 8_K 0.57 0.00
51_V 17_D 0.56 0.00
44_P 55_R 0.56 0.00
65_S 5_P 0.56 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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