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OPENSEQ.org
L28 - L33
UniProt: P60494 - P35871
Length: 152
Sequences: 940
Seq/Len: 7.97
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d16 3v2f16Contact Map
2j002j0116 2j0316Contact Map
4juw4jux16Contact Map
4kix4kixX1 4kizX1 4kj1X1 4kj3X1Contact Map
4kj54kj5X1 4kj7X1 4kj9X1 4kjbX1Contact Map
2zjr2zjrU1Contact Map
4btc4btd16Contact Map
3uyd3uyeZ6 3uygZ6Contact Map
3v223v2316 3v2516Contact Map
4gd13r8sX1 3r8tX1Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
10_K 25_K 0.76 0.00
4_V 34_L 0.72 0.00
35_T 27_K 0.69 0.00
44_P 53_K 0.68 0.00
36_G 8_K 0.67 0.00
47_Q 28_R 0.66 0.00
36_G 22_A 0.61 0.00
67_I 48_V 0.60 0.00
62_V 48_V 0.59 0.00
68_P 42_W 0.58 0.00
6_E 30_T 0.55 0.00
43_Y 33_K 0.55 0.00
2_S 22_A 0.55 0.00
63_A 17_K 0.55 0.00
14_V 49_H 0.54 0.00
56_Q 46_H 0.53 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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