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OPENSEQ.org
L27 - L31
UniProt: P60493 - Q5SJE1
Length: 156
Sequences: 1167
Seq/Len: 7.83
I_Prob: 0.01
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d04 3v2f04Contact Map
2j002j0104 2j0304Contact Map
4juw4jux04Contact Map
4btc4btd04Contact Map
3uyd3uye34 3uyg34Contact Map
3v223v2304 3v2504Contact Map
3uz63uz834 3uz934Contact Map
3ohc3ohj04 3ohk04Contact Map
3knh3kni04 3knk04Contact Map
3ohy3ohz04 3oi104Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
3_H 38_K 0.95 0.01
33_A 58_R 0.94 0.01
6_G 12_A 0.94 0.01
77_R 64_G 0.93 0.01
74_R 57_E 0.90 0.01
3_H 27_T 0.79 0.01
64_D 43_Y 0.73 0.01
68_E 21_V 0.67 0.01
30_V 3_E 0.65 0.01
8_G 10_V 0.64 0.01
35_N 35_V 0.63 0.01
57_F 61_R 0.62 0.01
62_L 56_V 0.61 0.01
31_V 19_G 0.61 0.01
32_R 66_S 0.61 0.01
35_N 58_R 0.58 0.01
47_P 63_Y 0.58 0.01
28_G 35_V 0.58 0.01
53_M 33_V 0.58 0.01
25_R 58_R 0.57 0.01
48_G 5_I 0.57 0.01
76_G 53_E 0.56 0.01
10_T 66_S 0.56 0.00
3_H 44_T 0.55 0.00
6_G 42_F 0.55 0.00
8_G 57_E 0.54 0.00
57_F 53_E 0.54 0.00
1_M 44_T 0.54 0.00
30_V 28_K 0.54 0.00
77_R 11_P 0.52 0.00
77_R 48_R 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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