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OPENSEQ.org
L27 - S15
UniProt: P60493 - Q5SJ76
Length: 174
Sequences: 1256
Seq/Len: 7.26
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2cO 3v2d0 3v2eO 3v2f0Contact Map
2j002j00O 2j010 2j02O 2j030Contact Map
4juw4juwO 4jux0Contact Map
4kix4kixW 4kiyO 4kizW 4kj0O 4kj1W 4kj2O 4kj3W 4kj4OContact Map
4kj54kj5W 4kj6O 4kj7W 4kj8O 4kj9W 4kjaO 4kjbW 4kjcOContact Map
3uyd3uydR 3uye3 3uyfR 3uyg3Contact Map
4gd13r8sW 3r8tW 4gd1O 4gd2OContact Map
3knh3knhO 3kni0 3knjO 3knk0Contact Map
3ohc3ohcO 3ohdO 3ohj0 3ohk0Contact Map
3f1e3f1eO 3f1f0 3f1gO 3f1h0Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
83_P 48_K 0.76 0.00
30_V 65_R 0.72 0.00
19_K 13_Q 0.69 0.00
14_R 88_R 0.69 0.00
7_L 43_L 0.68 0.00
7_L 60_V 0.67 0.00
76_G 26_E 0.64 0.00
6_G 5_K 0.63 0.00
28_G 74_D 0.62 0.00
81_V 41_E 0.62 0.00
39_R 15_F 0.61 0.00
32_R 2_P 0.60 0.00
8_G 62_Q 0.60 0.00
1_M 59_M 0.59 0.00
60_F 55_G 0.58 0.00
47_P 7_E 0.58 0.00
6_G 43_L 0.57 0.00
17_Q 20_G 0.56 0.00
3_H 62_Q 0.56 0.00
8_G 66_L 0.55 0.00
38_V 35_R 0.55 0.00
71_D 75_P 0.55 0.00
49_K 62_Q 0.55 0.00
57_F 57_L 0.54 0.00
26_Y 31_L 0.54 0.00
12_N 88_R 0.54 0.00
44_R 14_E 0.54 0.00
10_T 64_R 0.54 0.00
30_V 20_G 0.53 0.00
66_V 45_V 0.53 0.00
30_V 45_V 0.53 0.00
55_R 9_Q 0.53 0.00
47_P 9_Q 0.52 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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