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OPENSEQ.org
L27 - L36
UniProt: P60493 - Q5SHR2
Length: 122
Sequences: 706
Seq/Len: 5.83
I_Prob: 0.70
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d09 3v2f09Contact Map
2j002j0109 2j0309Contact Map
4juw4jux09Contact Map
4kix4kixW4 4kizW4 4kj1W4 4kj3W4Contact Map
4kj54kj5W4 4kj7W4 4kj9W4 4kjbW4Contact Map
2zjr2zjrT4Contact Map
4btc4btd09Contact Map
3v223v2309 3v2509Contact Map
4gd13r8sW4 3r8tW4Contact Map
3knh3kni09 3knk09Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
6_G 12_D 1.38 0.70
10_T 35_R 1.02 0.36
11_R 23_V 0.89 0.24
31_V 11_C 0.83 0.19
66_V 31_K 0.82 0.18
82_R 31_K 0.81 0.17
8_G 5_A 0.78 0.15
73_G 10_I 0.75 0.13
70_Q 31_K 0.73 0.13
18_A 37_G 0.73 0.12
38_V 15_K 0.71 0.11
75_L 31_K 0.70 0.11
63_V 28_E 0.69 0.11
23_V 5_A 0.66 0.09
61_A 3_V 0.66 0.09
7_L 20_H 0.66 0.09
45_F 27_C 0.66 0.09
17_Q 22_R 0.65 0.09
72_R 9_R 0.65 0.08
78_Y 4_R 0.62 0.07
45_F 32_H 0.61 0.07
15_D 13_K 0.60 0.07
74_R 28_E 0.59 0.06
53_M 22_R 0.58 0.06
62_L 17_I 0.58 0.06
81_V 3_V 0.58 0.06
32_R 18_R 0.57 0.06
63_V 20_H 0.57 0.06
47_P 17_I 0.57 0.06
36_I 20_H 0.57 0.06
19_K 34_Q 0.57 0.06
84_L 31_K 0.56 0.06
19_K 35_R 0.56 0.06
83_P 16_V 0.56 0.05
80_H 31_K 0.56 0.05
11_R 16_V 0.56 0.05
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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