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OPENSEQ.org
L27 - L30
UniProt: P60493 - Q5SHQ6
Length: 145
Sequences: 962
Seq/Len: 6.68
I_Prob: 0.00
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution. Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on HHsearch results which uses the overall probability and per-site alignment confidence. Inter-chain contacts in the pdb are in shades of red.
3v2c3v2d03 3v2f03Contact Map
2j002j0103 2j0303Contact Map
4juw4jux03Contact Map
4kix4kixWZ 4kizWZ 4kj1WZ 4kj3WZContact Map
4kj54kj5WZ 4kj7WZ 4kj9WZ 4kjbWZContact Map
2zjr2zjrTWContact Map
4btc4btd03Contact Map
3uyd3uye3X 3uyg3XContact Map
4gd13r8sWZ 3r8tWZContact Map
3ohc3ohj03 3ohk03Contact Map


 Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
3_H 10_K 0.87 0.00
77_R 35_R 0.71 0.00
1_M 30_R 0.66 0.00
10_T 42_A 0.66 0.00
37_L 12_P 0.65 0.00
6_G 25_A 0.65 0.00
45_F 7_K 0.64 0.00
7_L 25_A 0.64 0.00
80_H 1_M 0.62 0.00
73_G 8_L 0.61 0.00
60_F 55_R 0.61 0.00
47_P 38_E 0.61 0.00
59_L 48_E 0.59 0.00
11_R 13_I 0.58 0.00
27_E 8_L 0.58 0.00
81_V 17_K 0.56 0.00
30_V 6_V 0.55 0.00
78_Y 49_K 0.55 0.00
60_F 18_D 0.55 0.00
1_M 8_L 0.55 0.00
29_Q 23_L 0.54 0.00
77_R 30_R 0.53 0.00
81_V 60_E 0.53 0.00
55_R 5_K 0.52 0.00
10_T 50_V 0.51 0.00
35_N 30_R 0.51 0.00
27_E 42_A 0.50 0.00
59_L 33_Q 0.50 0.00
25_R 4_L 0.49 0.00
72_R 8_L 0.49 0.00
20_R 11_S 0.48 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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